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Genome Displays Related Resources Gene HomoloGene MANE RefSeq
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Report for CCDS36540.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
36540.1 |
Public |
Mus musculus |
12 |
Clmn |
23 |
108 |
98 |
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Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 36540.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000109936.2 |
ENSMUSP00000105562.1 |
Accepted |
alive |
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NCBI |
NM_001040682.1 |
NP_001035772.1 |
Accepted |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_001035772.1 |
1021 |
Q8C5W0-4 |
1021 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 36540.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (3066 nt): ATGGCTGCTCAGGAGTGGGACTGGTTCCAGCGCGAGGAGCTCATCGGGCAGATCAGCGACATCCGTGTGC AAAACCTGCAAGTGGAGAGGGAAAACGTGCAGAAGAGGACTTTCACACGATGGATAAACCTACACCTCGA AAAGTGTGACCCACCTCTAGAAGTTACGGACCTGTTTGTTGATATTCAAGATGGCAAAATCCTAATGGCT CTGTTAGAAGTCCTCTCTGGGCGAAATCTGCTGCATGAATACAAATCCTCATCACATCGTATTTTTCGGT TGAACAACATAGCGAAAGCACTCAAGTTTCTGGAAGATAGCAATGTCAAGCTGGTTAGCATCGATGCAGC GGAAATAGCGGACGGCAACCCCTCGCTGGTTCTCGGGCTGATATGGAACATCATTCTCTTCTTCCAGATA AAGGAGCTCACGGGCAACCTCAGCAGGAGTTCTCCATCTTCCAGCTTGTCACCGGGCTCTGGGGGCACCG ACTCCGACTCTTCCTACCCACCCACCCCCACCACCGAGAGGAGTGTGGCAGTGGCAGTGAAAGACCAGAG GAAGGCCATCAAGACCCTGCTGTCATGGGTGCAGAGGAAAACCAGGAAGTATGGTGTGGCAGTCCAAGAC TTTGCAGGCAGCTGGAGGAGTGGCCTGGCTTTCCTGGCTGTCATCAAAGCTATTGACCCCAGCCTTGTAG ACATGAAGCAGGCTCTGGAAGATTCCACCCGGGACAATCTGGAAAAGGCCTTCAGCATTGCCCATGATTC CCTGCATATCCCGAGGCTCCTGGAGCCGGAAGACATCATGGTTGACATGCCAGATGAGCAGTCCATTGTG ACATACGTGGCCCAGTTTCTAGAGCGCTTTCCAGAGTTGGAGCCTGAAGATTTTGTGAATCCGGACAAAG AAGCCCCCATCGAGTCCACCTTTGTCCGCATCAAAGAAAGCCCCTCTGAGCAGGGGAGCAGAGTCCTCCT CCTCAGCGAGAACGGAGAGCGGGCCTACACTGTCAACCAGGAAACCAGCTACCCGCCGCCTGACAAGGTC TTCGTCTGTGACCAGCTTGAGAGTCCGACTGGCTTCTGTCTGGATAGTGCTCCCAGCCACAAACTGTCAG ACAGCTCCACAGAGTTTATGCATGAGATTATTGACCAAGTCCTCCAGGGGAGCACGGGGAAGACTGGCTC CATCGCAGAGCCAACTCCAGAGTCGTCCATTTTGTCAACCAGAAAGGACGGCAGGAGGTCCAACTCTTTG CCTGTCAAGAAAACCGTCCACTTCGAGGCAGACTTGCACAAGGATGCCTCGTGTAGTAAGGACCCTTTCT ATAGCTCTGACTTCCGCTTCGAGGGGAGCCCCAAGGCAACCAAGGAGCTGTCAAAGCAGGACGGCCATGT CTCACTGGCTGAGGTGTCCAAGGAAAAGAAGAAGTCAGAACAGGAAGCCAGGCTAGTGCTGGAAGCTGCC TCAGACAAGGTCCCCGAAAGCACGGTCGATGGTCTGGATGCTGTGCCCCAAGATGCTCAGCCTTCCCAGG ACTCCTCCTTCTGTAACGGCACTGTAGAGAGCCCATCCAGCCAAGGTGAGAAAGGCCCTCCTCCATCATC CCCTGGAGATCATACTCTCCTGGCCAACTCCACTGAGCTCAAGGTTCAGCTGCTGACCGTTGAGCCTATG GACAAGGAAGACTACTTTGAATGCATCCCACTAAAAGCTTCAAAGTTTAACAGGGACCTAGTGGATTTCG CCTCCACCAGCCAGGCTTTTGGTGAGGATCCTTCGTCCCACGAGAAGACCCGTGGGGAGGAAGAGGGTTC TGAGAATCACGCTGAGAAACCAGGGAAAAGGAAATCAAAGTCTCCCCGTGCAGAAACAGAGGCCGCCGAG TCCAGATTGGAGCCCAAGAAGCTCGAGCCTCCTCCCAAGGATCCCGAACAAGAAGACCAAGGCCACGCTT TGCCCCCGGAAACCCCTGCAGACAAAAAGCCCAAAGTGTATGAAAAGGCCAAGAGAAAGTCCACTCGTCA TCACAGCGAGGAAGAAGGAGAAGCAGAAAGTGGCTTCTCTGCAGTCTGTGAAGAAGAAATACCATCCGCC CCTCCCAGCACCAGCGTCAGCCTGGAAACCCTCAGGAGTCACAGCGAAGAAGGTTTGGATTTCAAACCTT CGCCGCCGCTCTCGAAGATCTCTGTCATCCCCCACGACCTGTTCTACTACCCTCACTACGAAGTGCCCCT GGCCGCTGTGCTGGAGGCTTACGCGGAAGGCGGGGAGGATTTGAAAAGTGAAGACACAGACCTAGAGCAT CCAGAGGACAGCTATCTGCAGGACTCCAGGGAGGAGGAGGCCGACGAGGACGAGGAGGAGGCCCAGAGCT CTCAAAGCAGCTGCAGTTTCTCCTTGCCTGTTGACAACAGCTACCCCAGCGTCAGTGAGCATGTGTCCCA TGTCGATGGGAGTTCTGAGGGACCCACGTCAGCCTTGGGACCTGGCTCTCCACCCTCTCATGAGGACCAC CAGCCAAAGGAAACCAAAGAGAATGGCCCTGTGGAAAGCCAGCAGTCCCAAGAACCCCCAAACCCGGAAC TGCCCACAAAGCCATTAGAAGAAAAGTTAACGGAAGCCTCAACTAGCAGTAAAAAGAAGGAAAAACGGAA ACACATGGACCACGTAGAAAGCTCATTATTTATAGCCCCTGGGACGGTCCGCTCCTCAGACGACCTTGAA GAAAACTCCAGCGAACACAAGGTCCCTTCCAGGAATAGTCACAGTGACTCCAGCATTTACATTCGGCGAC ACACTAATAGGTCTTTGGAATTGGACCATTTTAGCTATGTTCAATTGAGGAACGCAGCTGATCTGGATGA CAGGAGAAACAGAGTGTTAAACAGGACTGGCACCAACTCCTCTGGAGAAGCTGTGCCCCTGGGGAACCAG AGCCCGCCCAACGACTCTCTGACGCAGTTTGTACAGCAGCCCGACGTGATATATTTCATTCTCTTCCTCT GGCTCCTCGTTTACTGCTTACTGCTCTTCCCACAGCTTGATGTCAGCCGGCTCTGA
Translation (1021 aa): MAAQEWDWFQREELIGQISDIRVQNLQVERENVQKRTFTRWINLHLEKCDPPLEVTDLFVDIQDGKILMA LLEVLSGRNLLHEYKSSSHRIFRLNNIAKALKFLEDSNVKLVSIDAAEIADGNPSLVLGLIWNIILFFQI KELTGNLSRSSPSSSLSPGSGGTDSDSSYPPTPTTERSVAVAVKDQRKAIKTLLSWVQRKTRKYGVAVQD FAGSWRSGLAFLAVIKAIDPSLVDMKQALEDSTRDNLEKAFSIAHDSLHIPRLLEPEDIMVDMPDEQSIV TYVAQFLERFPELEPEDFVNPDKEAPIESTFVRIKESPSEQGSRVLLLSENGERAYTVNQETSYPPPDKV FVCDQLESPTGFCLDSAPSHKLSDSSTEFMHEIIDQVLQGSTGKTGSIAEPTPESSILSTRKDGRRSNSL PVKKTVHFEADLHKDASCSKDPFYSSDFRFEGSPKATKELSKQDGHVSLAEVSKEKKKSEQEARLVLEAA SDKVPESTVDGLDAVPQDAQPSQDSSFCNGTVESPSSQGEKGPPPSSPGDHTLLANSTELKVQLLTVEPM DKEDYFECIPLKASKFNRDLVDFASTSQAFGEDPSSHEKTRGEEEGSENHAEKPGKRKSKSPRAETEAAE SRLEPKKLEPPPKDPEQEDQGHALPPETPADKKPKVYEKAKRKSTRHHSEEEGEAESGFSAVCEEEIPSA PPSTSVSLETLRSHSEEGLDFKPSPPLSKISVIPHDLFYYPHYEVPLAAVLEAYAEGGEDLKSEDTDLEH PEDSYLQDSREEEADEDEEEAQSSQSSCSFSLPVDNSYPSVSEHVSHVDGSSEGPTSALGPGSPPSHEDH QPKETKENGPVESQQSQEPPNPELPTKPLEEKLTEASTSSKKKEKRKHMDHVESSLFIAPGTVRSSDDLE ENSSEHKVPSRNSHSDSSIYIRRHTNRSLELDHFSYVQLRNAADLDDRRNRVLNRTGTNSSGEAVPLGNQ SPPNDSLTQFVQQPDVIYFILFLWLLVYCLLLFPQLDVSRL
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