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Report for CCDS35997.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35997.1 Public Mus musculus 10 Dohh 23 108 98 CCDS HistoryNCBI Gene:102115Re-query CCDS DB by CCDS ID:35997.1See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35997.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000072751.12 ENSMUSP00000072534.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000072751.12Link to Ensembl Protein Viewer:ENSMUSP00000072534.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000072751Re-query CCDS DB by Protein ID:ENSMUSP00000072534
Original member NCBI NM_133964.2 NP_598725.2 Updated not alive Link to Nucleotide Sequence:NM_133964.2Link to Protein Sequence:NP_598725.2Re-query CCDS DB by Nucleotide ID:NM_133964Re-query CCDS DB by Protein ID:NP_598725
Current member NCBI NM_133964.3 NP_598725.2 Accepted alive Link to Nucleotide Sequence:NM_133964.3Link to Protein Sequence:NP_598725.2Re-query CCDS DB by Nucleotide ID:NM_133964Re-query CCDS DB by Protein ID:NP_598725Link to BLAST:NP_598725.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_598725.2 302 Q99LN9-1 302 100% 0 0

Chromosomal Locations for CCDS 35997.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 81385774 81386047 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81386413 81386489 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81387240 81387480 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81387707 81388023 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (909 nt):
ATGGTAACGGAGCAAGAGATAGAGGCCATAGGGAAGACCTTGGTGGACCCCAAGCAGCCCCTGCAGGCCC
GCTTCCGGGCCCTGTTTACACTTCGGGGGCTTGGTGGCCCTGATGCTATCTCGTGGATCAGCCGGGGCTT
TGAGGACAGCTCTGCTCTTCTGAAGCACGAGCTGGCCTACTGCCTGGGCCAGATGAGGGACGCACGGGCC
ATCCCTGTGCTGGCGGATGTGCTGCAGGACACGAGCCAGGAGCCCATGGTGCGTCATGAGGCAGGGGAAG
CCCTGGGGGCGATTGGTAACCCGGAAGTTCTAGGCCTCCTGAAGCAGTATTCTACGGACCCAGTGGTTGA
GGTGGCTGAAACGTGCCAGCTCGCCGTTGGTCGTCTAGAGTGGCTACAGCAGCACCCGGGGGAGGCCACA
TGTGCAGGACCCTACCTCTCAGTGGACCCAGCACCCCCTGCAGCAGAGCAGGATGTGGGGAGGCTGCGGG
AGGCCCTGCTGGATGAGGCACGGCCACTCTTTGAGCGATACCGTGCCATGTTTGCCCTGCGCAACGTGGG
TGGCAAGGAGGCTGCCTTGGCCCTGGCTGAAGGCCTGCAGTGTGGCAGTGCGCTCTTCCGCCACGAGGTG
GGCTATGTGCTGGGTCAGCTGCAGCACGAGGCAGCCGTGCCCGGGCTGGCAGCCACATTGGCGCGGACCA
CTGAGAGTCCCATGGTGCGGCACGAGTGCGCAGAGGCCCTGGGTGCCATCGCCAGACCTGCCTGCCTGGC
TGCATTGCGAGAGCACATTGAGGACCCTGAGCAGGTGGTGCGGGAGAGCTGCGAGGTGGCCCTGGACATG
TATGAGTATGAGAGCAGCCAGGATTTCCAGTATGCAGACGGGCTGGAGCGCCTGCGGCCACCACCCTAA

Translation (302 aa):
MVTEQEIEAIGKTLVDPKQPLQARFRALFTLRGLGGPDAISWISRGFEDSSALLKHELAYCLGQMRDARA
IPVLADVLQDTSQEPMVRHEAGEALGAIGNPEVLGLLKQYSTDPVVEVAETCQLAVGRLEWLQQHPGEAT
CAGPYLSVDPAPPAAEQDVGRLREALLDEARPLFERYRAMFALRNVGGKEAALALAEGLQCGSALFRHEV
GYVLGQLQHEAAVPGLAATLARTTESPMVRHECAEALGAIARPACLAALREHIEDPEQVVRESCEVALDM
YEYESSQDFQYADGLERLRPPP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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