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Report for CCDS30393.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
30393.1 |
Public |
Mus musculus |
X |
Cenpi |
23 |
108 |
98 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:102920](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:30393.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome X in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 30393.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000081064.11 |
ENSMUSP00000079851.5 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000081064.11](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000079851.5](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000081064](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000079851](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000101251.7 |
ENSMUSP00000098809.1 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000101251.7](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000098809.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000101251](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000098809](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001305631.1 |
NP_001292560.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001305631.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001292560.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001305631](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001292560](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001292560.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_145924.3 |
NP_666036.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_145924.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_666036.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_145924](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_666036](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_666036.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 30393.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (2241 nt): ATGGCAACTCAAAGGGTTACTAGAAACTCCCAGCAACAAAACAGAATTTCTCAAGGCAGTAATAGCCGTC AAACCAGTCTCTTAGACTGGATGGTGAAAGACAAATCAGGCAACTTCAAGAGTGTCTTGAAAGAAAGCAG TTCAGTGGAAGATTCTACACGCACTGATGATCGAACTGAAGGTGCTCTGCAGGTAGCAGTAGGATACTTC CAGAAAGGTCCTAAGAAAGCTTCACTAAGTAAAGATAAGGTCTTGGAAAAACACTTGACAACTGTTGAAA ATGTGGCTTTGAGCAATGGCTTAGCTCCAGAGGCAATTGATATTTTACTGAATGTGGCACTCAGTGGCAA GTTTGGGAATGCTGTAAACTCACGGATATTGAAGTGCATGATTCCAGAAAGTCACATATCAGAAGATTCC GTGCTTAAAGCAGTATCCTGGCTCTGTGTTGACAAGTGTTCTGGTAATACCAAGGTACTTTTTTATCGTT GGTTGGTTGCGATGTTTGACTTTATTGATCATAAGAAGCAAATTAGTTCTCTGTATGGCTTCTTTTTTGC TTCATTGCAAGATGATACTCTGTGCCCGTACGTTTGCCATTTGTTATATTTACTGACCAAAAGGGAGAAT GTCAAACCATTTCGTGTGAGAAAATTGCTCGATCTCCAGGCCAAAATGGGAATGCAGCCCCACCTCCAGG CTTTGTTGTCGCTGTATAAGTTCTTCGCTCCTACTTTGATTTCTGTATCTTTGCCTGTAAGGAAGAAGAT CTTTTTCAATAATTCAAAAAATCTGTGGACTTCAGCTTCCCTTGCTGTGAGGCTAAGGAACCAGGGAGCT TTTCCAGAACCTCTAAACCTTCCATTACGCCCAACTACGGGCCGTTCTCTAAAGAGGAAATGGAATTCTC ACTCAGTTATACCAGCACTAAATTCTGCTAACAAAGAATATGGAGAGAAGACGGCGAGTCTGTTTGATTA TCTCAGCAGTGAAAGATCACTTCCACTAGAACAGCTTCAACGTTTCCCTCAGCTTTTAGAGAGCATCCAT TGTTTAGAGCTCCCTTCTCAGATGTGCTCAGTGCTAAACAGCCCTCTGCTACTTCACTATATTAATTGTG TCAAAGATGAGTCAATCTTACTGAGGATCTCTTATTGGTTGAGTCAAGCATTACAAGAAGAATGTGTGTG GTATAATATAAATAATTATGAACAAGAAAAGGAATTTATAAACTTTCTGGACCTGGTCATCAGGGTACAG TGCTTCTTACAAGAGGGATTTTACTCCTGTGAGGCATTCCTGTATAAAAGCCTGCCTCTCTGGGATGGCT CCTCTTGTCGGTCACAGTACCTTCAGCTTCTGGCCTGGATTCCATTCAGTAGCTTCTCTGAGGTGAAGCC ACTTCTTTCTGATCATCTAGCACCTCTCTTCTTTACATCAAGTATTTATTTCAAGTGTAGTGTTCTTCAA AGTCTGCAAGAATTACTGCAGAATTGGCTGCTTTGGCTCTCTACGGATGCGCATGTGCAGCCCACGACAG ACAGTCCTCTGGAGACAACTCTGGGTGGATCCATGAGTTCTGTGTCTCAATTGATTGAGTACACAGGCTG GCTGTGCGTGGTTGCAATGCGCTTGGAGAGCAGCAGTACATTGTTGTTGCACTTTATTTTGGACTTCTAT GAGAAGGTGTGTGATATATATATAAATTATGACCTTCCGATAGTGGTATTGTTTCCTCCTGTGATCTTCC ATTCTGCACTCCTAAGCCTGGATGCCACCATCTTGAACCAACTCTGTTACATTATGTACAGGTATCGCAA TAATTGGACAGCTGCGAAGAAAAACCGCTATTTACAGAAGGCCAAACCAGAGTTCAGTCTCAGCAGCAAG ATCTGTAAAGAGTATAATTACTATTTGACAGCTATGGTTTGTTGTCTATGGACGTCCAGACCATTTAAAG CAGGAGTGTACACTGACCCCGAAACCATAGAAAATACTGGAGGAACACAGTATAAAAGCACCTTAAATAT TGTCTACCATCCTTCTCTACTGAGCTATGCAGCTTCCTTCTTGCTACAGGAGAGCCCAGAAGAAATGACA GAACACCTGAGCTCTATTCAGGGGAAGAAATGGAACTGGTATTTGGACTATTTATATTCAGAGGGTTTTC AGGGCTTAAAACTTTTCATAAAAAGCAGTGTCCATAGTTCTGTACCCAAACCAGAGGAAAACACAGAGTG A
Translation (746 aa): MATQRVTRNSQQQNRISQGSNSRQTSLLDWMVKDKSGNFKSVLKESSSVEDSTRTDDRTEGALQVAVGYF QKGPKKASLSKDKVLEKHLTTVENVALSNGLAPEAIDILLNVALSGKFGNAVNSRILKCMIPESHISEDS VLKAVSWLCVDKCSGNTKVLFYRWLVAMFDFIDHKKQISSLYGFFFASLQDDTLCPYVCHLLYLLTKREN VKPFRVRKLLDLQAKMGMQPHLQALLSLYKFFAPTLISVSLPVRKKIFFNNSKNLWTSASLAVRLRNQGA FPEPLNLPLRPTTGRSLKRKWNSHSVIPALNSANKEYGEKTASLFDYLSSERSLPLEQLQRFPQLLESIH CLELPSQMCSVLNSPLLLHYINCVKDESILLRISYWLSQALQEECVWYNINNYEQEKEFINFLDLVIRVQ CFLQEGFYSCEAFLYKSLPLWDGSSCRSQYLQLLAWIPFSSFSEVKPLLSDHLAPLFFTSSIYFKCSVLQ SLQELLQNWLLWLSTDAHVQPTTDSPLETTLGGSMSSVSQLIEYTGWLCVVAMRLESSSTLLLHFILDFY EKVCDIYINYDLPIVVLFPPVIFHSALLSLDATILNQLCYIMYRYRNNWTAAKKNRYLQKAKPEFSLSSK ICKEYNYYLTAMVCCLWTSRPFKAGVYTDPETIENTGGTQYKSTLNIVYHPSLLSYAASFLLQESPEEMT EHLSSIQGKKWNWYLDYLYSEGFQGLKLFIKSSVHSSVPKPEENTE
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