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Report for CCDS10726.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10726.1 Public Homo sapiens 16 DNAJA2 24 110 108 CCDS HistoryNCBI Gene:10294Re-query CCDS DB by CCDS ID:10726.1See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10726.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000317089.10 ENSP00000314030.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000317089.10Link to Ensembl Protein Viewer:ENSP00000314030.5Re-query CCDS DB by Nucleotide ID:ENST00000317089Re-query CCDS DB by Protein ID:ENSP00000314030
Original member Current member NCBI NM_005880.4 NP_005871.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005880.4Link to Protein Sequence:NP_005871.1Re-query CCDS DB by Nucleotide ID:NM_005880Re-query CCDS DB by Protein ID:NP_005871Link to BLAST:NP_005871.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_005871.1 412 O60884 412 100% 0 0

Chromosomal Locations for CCDS 10726.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 46957029 46957220 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 46959003 46959130 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 46959275 46959419 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 46964611 46964807 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 46967513 46967646 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 46968084 46968164 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 46971349 46971572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 46971896 46971955 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 46973495 46973572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1239 nt):
ATGGCTAACGTGGCTGACACGAAGCTGTACGACATCCTGGGCGTCCCGCCCGGCGCCAGCGAGAACGAGC
TGAAGAAGGCATACAGAAAGTTAGCCAAGGAATATCATCCTGATAAGAATCCAAATGCAGGAGACAAATT
TAAAGAAATAAGTTTTGCATATGAAGTACTATCAAATCCTGAGAAGCGTGAGTTATATGACAGATACGGA
GAGCAAGGTCTTCGGGAAGGCAGCGGCGGAGGTGGTGGCATGGATGATATTTTCTCTCACATTTTTGGTG
GGGGATTGTTCGGCTTCATGGGCAATCAGAGTAGAAGTCGAAATGGCAGAAGAAGAGGAGAGGACATGAT
GCATCCACTCAAAGTATCTTTAGAAGATCTGTATAATGGCAAGACAACCAAACTACAACTTAGCAAGAAT
GTGCTCTGTAGTGCATGCAGTGGCCAAGGCGGAAAGTCTGGAGCTGTCCAAAAGTGTAGTGCTTGTCGAG
GTCGAGGTGTGCGCATCATGATCAGACAGCTGGCTCCAGGGATGGTACAACAGATGCAGTCTGTGTGCTC
TGATTGTAATGGAGAAGGAGAGGTAATTAATGAAAAAGACCGCTGTAAAAAATGTGAAGGGAAGAAGGTG
ATTAAAGAAGTCAAGATTCTTGAAGTCCACGTAGACAAAGGCATGAAACATGGACAGAGAATTACATTCA
CTGGGGAAGCAGACCAGGCCCCAGGAGTGGAACCCGGAGACATTGTTCTTTTGCTACAGGAGAAAGAACA
TGAGGTATTTCAGAGAGATGGGAATGATTTGCACATGACATATAAAATAGGACTTGTTGAAGCTCTATGT
GGATTTCAGTTCACATTTAAGCACCTTGATGGACGTCAGATTGTGGTGAAATACCCCCCTGGCAAAGTAA
TTGAACCAGGGTGTGTTCGTGTAGTTCGAGGTGAAGGGATGCCGCAGTATCGTAATCCCTTTGAAAAAGG
TGATCTTTACATAAAGTTTGATGTGCAGTTTCCTGAAAACAACTGGATCAACCCAGACAAGCTTTCTGAA
CTAGAAGATCTTCTGCCATCTAGACCGGAAGTTCCTAACATAATTGGAGAAACAGAGGAGGTAGAGCTTC
AGGAATTTGATAGCACTCGAGGCTCAGGAGGTGGTCAGAGGCGTGAAGCCTATAATGATAGCTCTGATGA
AGAAAGCAGCAGCCATCATGGACCTGGAGTGCAGTGTGCCCATCAGTAA

Translation (412 aa):
MANVADTKLYDILGVPPGASENELKKAYRKLAKEYHPDKNPNAGDKFKEISFAYEVLSNPEKRELYDRYG
EQGLREGSGGGGGMDDIFSHIFGGGLFGFMGNQSRSRNGRRRGEDMMHPLKVSLEDLYNGKTTKLQLSKN
VLCSACSGQGGKSGAVQKCSACRGRGVRIMIRQLAPGMVQQMQSVCSDCNGEGEVINEKDRCKKCEGKKV
IKEVKILEVHVDKGMKHGQRITFTGEADQAPGVEPGDIVLLLQEKEHEVFQRDGNDLHMTYKIGLVEALC
GFQFTFKHLDGRQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKFDVQFPENNWINPDKLSE
LEDLLPSRPEVPNIIGETEEVELQEFDSTRGSGGGQRREAYNDSSDEESSSHHGPGVQCAHQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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