NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS13931.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13931.1 Public Homo sapiens 22 CACNG2 24 110 108 CCDS HistoryNCBI Gene:10369Re-query CCDS DB by CCDS ID:13931.1See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13931.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000300105.7 ENSP00000300105.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000300105.7Link to Ensembl Protein Viewer:ENSP00000300105.6Re-query CCDS DB by Nucleotide ID:ENST00000300105Re-query CCDS DB by Protein ID:ENSP00000300105
Original member Current member NCBI NM_006078.5 NP_006069.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006078.5Link to Protein Sequence:NP_006069.1Re-query CCDS DB by Nucleotide ID:NM_006078Re-query CCDS DB by Protein ID:NP_006069Link to BLAST:NP_006069.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_006069.1 323 Q9Y698 323 100% 0 0

Chromosomal Locations for CCDS 13931.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 36564351 36564886 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 36566353 36566493 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 36587465 36587548 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 36702366 36702576 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (972 nt):
ATGGGGCTGTTTGATCGAGGTGTTCAAATGCTTTTAACCACCGTTGGTGCTTTCGCTGCCTTCAGCCTGA
TGACCATAGCTGTGGGAACCGACTATTGGCTCTACTCCAGAGGGGTTTGCAAGACCAAAAGTGTCAGTGA
GAATGAAACCAGCAAAAAGAACGAGGAAGTTATGACCCATTCCGGATTATGGAGAACCTGCTGCCTAGAA
GGGAATTTCAAAGGTCTGTGCAAGCAAATTGATCACTTCCCAGAGGATGCAGATTACGAAGCTGACACAG
CAGAATATTTCCTCCGGGCCGTGAGGGCCTCCAGCATTTTCCCAATCCTGAGTGTGATTCTGCTTTTCAT
GGGTGGCCTCTGCATCGCAGCCAGCGAGTTCTACAAAACTCGACACAACATCATCCTGAGTGCCGGCATC
TTCTTCGTGTCTGCAGGTCTGAGTAACATCATTGGCATCATAGTGTACATATCTGCCAATGCCGGAGACC
CCTCCAAGAGCGACTCCAAAAAGAATAGTTACTCATACGGCTGGTCCTTCTACTTCGGGGCCCTGTCCTT
CATCATCGCCGAGATGGTCGGGGTGCTGGCGGTGCACATGTTTATCGACCGGCACAAACAGCTGCGGGCC
ACGGCCCGCGCCACGGACTACCTCCAGGCCTCTGCCATCACCCGCATCCCCAGCTACCGCTACCGCTACC
AGCGCCGCAGCCGCTCCAGCTCGCGCTCCACGGAGCCCTCACACTCCAGGGACGCCTCCCCCGTGGGCAT
CAAGGGCTTCAACACCCTGCCGTCCACGGAGATCTCCATGTACACGCTCAGCAGGGACCCCCTGAAGGCC
GCCACCACGCCCACCGCCACCTACAACTCCGACAGGGATAACAGCTTCCTCCAGGTTCACAACTGTATCC
AGAAGGAGAACAAGGACTCTCTCCACTCCAACACAGCCAACCGCCGGACCACCCCCGTATAA

Translation (323 aa):
MGLFDRGVQMLLTTVGAFAAFSLMTIAVGTDYWLYSRGVCKTKSVSENETSKKNEEVMTHSGLWRTCCLE
GNFKGLCKQIDHFPEDADYEADTAEYFLRAVRASSIFPILSVILLFMGGLCIAASEFYKTRHNIILSAGI
FFVSAGLSNIIGIIVYISANAGDPSKSDSKKNSYSYGWSFYFGALSFIIAEMVGVLAVHMFIDRHKQLRA
TARATDYLQASAITRIPSYRYRYQRRSRSSSRSTEPSHSRDASPVGIKGFNTLPSTEISMYTLSRDPLKA
ATTPTATYNSDRDNSFLQVHNCIQKENKDSLHSNTANRRTTPV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH