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Report for CCDS29475.2 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
29475.2 |
Public |
Mus musculus |
19 |
Pcnx3 |
23 |
108 |
98 |
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Public Note for CCDS 29475.1 |
The coding region has been updated to represent an alternate exon or splice site that is more supported by the available transcript and protein data. |
Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Reviewed (by RefSeq, Havana and CCDS collaboration) Sequence IDs included in CCDS 29475.2
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000113615.8 |
ENSMUSP00000109245.2 |
Accepted |
alive |
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NCBI |
NM_144868.3 |
NP_659117.2 |
Accepted |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_659117.2 |
2028 |
Q8VI59-1 |
2028 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 29475.2
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (6087 nt): ATGGGGTCTCAGGTGTTGCAGATCCTGCGCCAGGGGGTGTGGGCCTCGCTCACTGGGGGATGGTTCTTCG ATCCGCATCAGAGCACCTTCTCCAACTGCTTCCATCTCTATGTCTGGATCTTCTTGCTCATCTTTCCCTT CTTGCTGTACATGGTCCTGCCCCCCAGCCTGATGGTGGCTGGAGTGTACTGCCTGGTGGTAGCTGTCATC TTTGCTACCATCAAGACTGTGAACTATCGCCTGCATGCCATGTTCGACCAGGGCGAGATTGTGGAGAAAC GCAACTCTACCATGGGGGAGCAGGAAGAAGAGGCTGCCCAGGGGGAGAGCAGTCTCCCAAGGGACCCTGG TGTGGAGATGACGGTGTTCCGGAAGGTGAGCTCCACGCCCCCTGTACGCTGCAGTTCCCAGCATTCTGTG TTTGGCTTCAACCAGGTTTCGGAGTTGCTGCCCCGGATGGAGGATTCTGGGCCCCTCAGAGACATCAAGG AGCTGGTACGGGAACAGGGCAGCAACAACGTGATCGTGACCTCTGCCGATCGAGAAATGCTGAAGCTCAG CTCCCAAGAGAAACTGATTGGAGACCTTCCCCAGACACCTCCAGGGGTTGTTCCAGACCCCTCTCTCCCC AGTACGGATTCTTCCGAGCGTTCTCCCATGGCTGGAGATGGTGTCCCCTGGGGTGGGAGCGGTGTGGCTG ACACTCCCATGAGCCCTTTACTGAAAGGGAGCCTCAGCCAGGAGCTAAGCAAGAGCTTTCTGACCCTGAC CCGGCCTGACCGGGCCCTAGTGAGGACCAGTAGTCGGCGGGAACAATGTCGGGGAACTGGAGGCTACCAG CCCCTGGACCGGAGGGGCTCAGGTGACCCCATGCCCCAGAAAGCTGGCTCTTCGGATTCCTGCTTCAGTG GCACTGACAGGGAGACTCTGAGCAGCTTCAAGAGTGAGAAGACTAACTCTACACACCTCGACAGTCCCCC TGGTGGGCATGCTCCCGAGGGCAGCGACACAGACCCTCCTTCTGAGGCTGAGCTGCCTGCCTCCCCAGAT GCTGGGGTCCCCTCAGATGACACACTTCGTTCCTTTGACACAGTCATTGGAGCAGGGACACCACCGGGCC AAACGGAGCCGCTCCTGGTTGTGCGGCCCAAGGACTTGGCCCTGCTTCGGCCTAGCAAGCGGCGGCCCCC CATGCGAGGACATTCCCCACCTGGTCGTACCCCAAGACGGCCCTTGCTTGAGGGCTCAGGCTTCTTTGAA GATGAAGATACCAGTGAAGGTAGTGAGCTGAGTCCAGCATCCAGTCTCCGGTCTCAGCGCCGCTATAGCA CTGATAGCTCCTCGTCTACTTCTTGCTACTCCCCCGAGAGCTCCCAGGGTGCAGCAGGGGGTCCTCGGAA GCGGCGGGCCCCTCATGGGGCCGAAGAAGGAACTGCTGTGCCCCCTAAGCGACCCTATGGGACCCAGCGG ACGCCCAGTACTGCCAGTGCCAAAACTCATGCCCGTGTGTTGAGCATGGATGGGGCAGGGGGTGATGTCT TACGGGCACCCCTGGCGGGCTCCAAGGCTGAGCTGGAGGCCCAGCCAGGAATGGAGCTGGCTGCTGGTGA GCCTGCTGTGTTGCCTCCTGAAGCCCGGAGGGGACCCGCTGCCAACCAGCCTGGCTGGCGGGGGGAGCTG CAGGAGGAAGGTGCTGTAGGGGGAGCACCTGAGGAAACAGGTCAGCGGGAATGCACAAGCAATGTGAGGA GAGCTCAAGCTATCCGGAGACGACACAATGCAGGCAGCAACCCTACGCCTCCAGCCTCTGTCATGGGCTC ACCACCTAGCAGCCTGCAGGAGGCTCAGCGGGGCCGGGCTGCTTCCCACTCCAGGGCACTGACTCTGCCC TCCGCTCTGCACTTTGCCTCTTCCCTGTTGCTCACCCGAGCTGGCCCCAACGTCCATGAAGCCAGCAATT TTGATGACACCTCTGAGGGTGCTGTGCACTATTTCTACGACGAGAGTGGTGTACGACGGTCGTATACCTT TGGCCTAGCTGGAGGTGGCTACGAGAACCCTGTGAGTCAGCCAGGCGAGCAGGCAGCCAATGGAGCCTGG GACCGTCACTCACATTCCTCCAGCTTCCACTCAGCTGATGTGCCTGAAGCCACGGGAGGCTTGAACCTGT TGCAGCCAAGGCCAGTAGTTCTTCAGGGTATGCAGGTGCGCAGGGTGCCCCTGGAAATCCCAGAGGAGCA GACACTGATGGAGGAGGCACCACCCCGGGCCCAGCACAGCTACAAGTACTGGTTTCTTCCTGGCCGTTGG ACCTCTGTGCGCTACGAACGGCTGGCCCTGCTAGCTCTGTTGGACCGGACACGTGGGGTAATGGAGAACA TTTTCGGTGTTGGATTGAGCAGCCTGGTTGCCTTCCTGGGATACCTGTTGCTGCTCAAGGGCTTCTTCAC TGACATCTGGGTCTTCCAGTTCTGTCTGGTCATCGCCTCCTGTCAGTACTCCCTGCTCAAGAGCGTGCAG CCTGATGCAGCATCCCCAATGCACGGCCACAACTGGGTGATTGCATACAGCCGGCCTGTCTACTTCTGTA TCTGCTGTCTACTCATCTGGCTGCTGGATGCCCTGGGGACCGCTCAGCCCTTCCCACCTGTCTCTCTGTA CGGCCTCACACTCTTCTCTGCCTCTTTCTTCTTTTGTGCCCGAGATGTGGCCACTGTGTTCACCTTATGC TTTCCGTTCGTCTTCCTCCTGGGCCTCCTGCCCCAGGTCAACACCTGCCTCATGTACCTCCTGGAGCAGA TAGACATGCATGGCTTTGGAGGCACAGCTGCCACCAGCCCACTCACTGCGGTCTTCAGCCTCACGCGAAG CCTGCTGGCTGCTGCCCTGCTTTATGGCTTCTGCCTTGGGGCCATCAAGACACCTTGGCCAGAGCAGCAC GTCCCTGTCCTCTTCTCAGTCTTCTGTGGCCTCCTGGTGGCAATGTCCTACCATCTGAGCCGGCAGAGCA GCGACCCCACCGTTCTCTGGTCTCTAGTCCGGAGTAAACTCTTCCCTGAGCTAGAGGAGCGGAGCCTAGA GACAGCCCGGGTCGAACCCCCAGACCCACTGCCAGAGAAGATGCGTCAGTCAGTGCGGGAAGTCTTGCAC TCCGACCTGGTGATGTGTGTGGTGATCGCCGTGCTCACCTTTGCCGTCAGTGCCAGCACCGTCTTCATTG CCCTGAAGTCAGTTCTGGGCTTCGTGTTATATGCGCTGGCAGGAGCCGTGGGCTTCTTCACGCATTACCT GCTGCCACAGCTGCGCAAACAGCTCCCCTGGTTCTGCCTCTCACAGCCTGTGCTGAAGCCACTGGAGTAT AGCCAGTATGAAGTGCGAGGCGCTGCCCAGGTGATGTGGTTTGAGAAGCTCTACGCTGGCCTGCAGTGTG CTGAGAAGTACCTCATCTACCCTGCCGTGGTCCTCAACGCTCTCACAGTGGACGCCCACACAGTCGTCAG CCACCCAGACAAATTCTGCCTCTACTGCCGGGCCTTGCTGATGACTGTGGCGGGGCTGAAGCTGCTGCGC TCGGCCTTCTGTTGCCCACCCCAGCAGTACCTGACCTTGGCCTTCACTGTCCTCCTCTTCCACTTCGACT ACCCGAGGCTCTCACAGGGCTTCCTGCTTGACTACTTCCTCATGTCTCTGCTCTGCAGCAAGCTTTGGGA CCTGCTGTACAAGCTGCGTTTTGTACTGACCTACATTGCACCATGGCAGATCACCTGGGGCTCAGCCTTC CATGCCTTTGCCCAGCCCTTCGCTGTACCACACTCAGCTATGCTGTTCCTTCAGGCCCTGCTCTCAGGGC TCTTTTCTACCCCACTCAACCCCCTGCTGGGCAGCGCAGTCTTCATCATGTCCTACGCAAGGCCCCTCAA GTTCTGGGAGAGGGACTACAACACTAAACGTGTGGACCATTCTAACACTCGCCTAGTGACACAGCTGGAC CGGAACCCAGGCGCTGATGACAACAACCTCAACTCCATCTTCTATGAGCACTTGACACGCTCGCTGCAGC ACACGCTGTGTGGGGATCTGGTGCTGGGCCGCTGGGGCAATTATGGCCCTGGAGACTGCTTTGTCCTGGC CTCTGACTACCTCAACGCGCTAGTGCACCTCATTGAGGTTGGCAATGGCCTCATCACCTTCCAGCTTCGT GGCCTTGAGTTCCGGGGCACATACTGCCAGCAGCGTGAGGTGGAGGCCATCACGGAAGGTGTGGAGGAAG ACGAGGGCTGCTGTTGCTGTGAGCCTGGTCACCTGCCCCGGGTCCTGTCCTTCAATGCTGCCTTTGGGCA GCGCTGGCTGGCCTGGGAGGTGACAGCCAGCAAGTACGTGCTGGAAGGCTACAGCATCAGTGACAACAAC GCAGCCTCCATGCTGCAGGTGTTTGACCTCCGCAAGATCCTCGTCACTTACTATGTCAAGAGCATCATCT ACTATGTGAGCCGCTCTCCAAAGCTAGAGACCTGGCTGAACCATGAGGGCATCGCCGCTGCCCTCCGGCC TGTGCGAGCCCTTGGTTACGCAGACTCGGACCCCACCTTCTCACTGAGTGTTGACGAGGACTACGACCTC CGGTTGTCTGGCCTCTCCCTGCCATCCTTCTGCGCTGTCCACCTCGAGTGGATCCAGTACTGTGCCTCTC GGCGCAGCCAGCCCGTGGACCAGGACTGGAATTCACCGTTGGTTACACTGTGCTTTGGCCTGTGTGTGCT GGGTCGCCGGGCCCTGGGAACAGCGTCACACAGTATGTCTGCCAGCCTGGAGCCCTTCCTCTATGGCCTG CACGCCCTGTTCAAGGGGGACTTCCGCATCACCTCTCCCCGTGACGAGTGGGTCTTTGCCGACATGGATC TGCTTCACCGAGTGGTAGCCCCTGGGGTTCGCATGGCCCTCAAGCTTCACCAGGACCATTTCACATCTCC TGATGAGTATGAGGAACCAGCAGCCCTGTATGACGCCATCGCGGCCAATGAGGAGCGGCTAGTCATCTCA CATGAGGGGGACCCTGCCTGGCGCAGTGCCATCCTCAGCAACACCCCCTCCCTGCTGGCGCTGCGCCATG TCATGGACGACGCTTCTGACGAGTACAAGATCATCATGCTCAACAGGCGCCACCTCAGCTTCCGAGTCAT CAAGGTAAACCGAGAGTGTGTGCGTGGGCTGTGGGCTGGGCAGCAACAAGAGCTGGTGTTCCTGCGCAAC CGCAACCCTGAGCGCGGCAGCATCCAGAATGCCAAGCAGGCACTCCGCAACATGATCAATTCCTCCTGCG ACCAGCCACTGGGATATCCCATCTACGTGTCACCTCTTACCACATCTCTGGCTGGTAGCCACCCCCAACT GCGGGCGCTGTGGGGTGGTCCTGTCAGCCTGGGTGCCATTGCCCGATGGCTCTTGCGCAGCTGGGAGAGA CTTCATAAGGGCTGTGGCGCTGGCTGTAATAGCGGAGGGAATGTGGATGACTCGGACTGTGGTGGGGGTG GCGGCCTGACCTCCCTCAGCAATCATCCGCCCTTGGCACACCCTACGCCTGAAAATGCAGCAGGCAGCAG TGAGCAGCCCCTCCCACCAGGTCCTAGCTGGGGACCACGGCCTTCCCTCAGTGGCTCTGGTGATGGGCGG CCCCCTCCTCTGCTGCAGTGGCCTCCCCCTCGGCTCCCTGGACCACCCCCTGCTTCACCTGCTCCCACTG AGGGTCCCCGGCCCTCAAGACCTTCTGGCCCTGCTCTCCTCAATTCTGAGGGACCCAGTGGGAAGTGGAG TCTGGGGGGTCGGAAGGGACTGGGAGGACCTGATGGGGAGCCAGCCTCAGGGAGCCCCAAAGGAGGCACC CCCAAATCTCAGGCCCCTCTAGACCTCAGCCTCAGTCCTGATGTCAGCTCTGAGGCCTCACCTGCCAGAA CCACCCAGGACCTTCCTTGCTTGGACAGCAGTATTCCTGAGGGTTGCACACCCTCCGGTGCCCCAGGTGA CTGGCCTGTCCCTGCTGAGGAACGCGAGAGCCCGGCTGCCCAGCCCTTGCTGGAGCATCAGTACTGA
Translation (2028 aa): MGSQVLQILRQGVWASLTGGWFFDPHQSTFSNCFHLYVWIFLLIFPFLLYMVLPPSLMVAGVYCLVVAVI FATIKTVNYRLHAMFDQGEIVEKRNSTMGEQEEEAAQGESSLPRDPGVEMTVFRKVSSTPPVRCSSQHSV FGFNQVSELLPRMEDSGPLRDIKELVREQGSNNVIVTSADREMLKLSSQEKLIGDLPQTPPGVVPDPSLP STDSSERSPMAGDGVPWGGSGVADTPMSPLLKGSLSQELSKSFLTLTRPDRALVRTSSRREQCRGTGGYQ PLDRRGSGDPMPQKAGSSDSCFSGTDRETLSSFKSEKTNSTHLDSPPGGHAPEGSDTDPPSEAELPASPD AGVPSDDTLRSFDTVIGAGTPPGQTEPLLVVRPKDLALLRPSKRRPPMRGHSPPGRTPRRPLLEGSGFFE DEDTSEGSELSPASSLRSQRRYSTDSSSSTSCYSPESSQGAAGGPRKRRAPHGAEEGTAVPPKRPYGTQR TPSTASAKTHARVLSMDGAGGDVLRAPLAGSKAELEAQPGMELAAGEPAVLPPEARRGPAANQPGWRGEL QEEGAVGGAPEETGQRECTSNVRRAQAIRRRHNAGSNPTPPASVMGSPPSSLQEAQRGRAASHSRALTLP SALHFASSLLLTRAGPNVHEASNFDDTSEGAVHYFYDESGVRRSYTFGLAGGGYENPVSQPGEQAANGAW DRHSHSSSFHSADVPEATGGLNLLQPRPVVLQGMQVRRVPLEIPEEQTLMEEAPPRAQHSYKYWFLPGRW TSVRYERLALLALLDRTRGVMENIFGVGLSSLVAFLGYLLLLKGFFTDIWVFQFCLVIASCQYSLLKSVQ PDAASPMHGHNWVIAYSRPVYFCICCLLIWLLDALGTAQPFPPVSLYGLTLFSASFFFCARDVATVFTLC FPFVFLLGLLPQVNTCLMYLLEQIDMHGFGGTAATSPLTAVFSLTRSLLAAALLYGFCLGAIKTPWPEQH VPVLFSVFCGLLVAMSYHLSRQSSDPTVLWSLVRSKLFPELEERSLETARVEPPDPLPEKMRQSVREVLH SDLVMCVVIAVLTFAVSASTVFIALKSVLGFVLYALAGAVGFFTHYLLPQLRKQLPWFCLSQPVLKPLEY SQYEVRGAAQVMWFEKLYAGLQCAEKYLIYPAVVLNALTVDAHTVVSHPDKFCLYCRALLMTVAGLKLLR SAFCCPPQQYLTLAFTVLLFHFDYPRLSQGFLLDYFLMSLLCSKLWDLLYKLRFVLTYIAPWQITWGSAF HAFAQPFAVPHSAMLFLQALLSGLFSTPLNPLLGSAVFIMSYARPLKFWERDYNTKRVDHSNTRLVTQLD RNPGADDNNLNSIFYEHLTRSLQHTLCGDLVLGRWGNYGPGDCFVLASDYLNALVHLIEVGNGLITFQLR GLEFRGTYCQQREVEAITEGVEEDEGCCCCEPGHLPRVLSFNAAFGQRWLAWEVTASKYVLEGYSISDNN AASMLQVFDLRKILVTYYVKSIIYYVSRSPKLETWLNHEGIAAALRPVRALGYADSDPTFSLSVDEDYDL RLSGLSLPSFCAVHLEWIQYCASRRSQPVDQDWNSPLVTLCFGLCVLGRRALGTASHSMSASLEPFLYGL HALFKGDFRITSPRDEWVFADMDLLHRVVAPGVRMALKLHQDHFTSPDEYEEPAALYDAIAANEERLVIS HEGDPAWRSAILSNTPSLLALRHVMDDASDEYKIIMLNRRHLSFRVIKVNRECVRGLWAGQQQELVFLRN RNPERGSIQNAKQALRNMINSSCDQPLGYPIYVSPLTTSLAGSHPQLRALWGGPVSLGAIARWLLRSWER LHKGCGAGCNSGGNVDDSDCGGGGGLTSLSNHPPLAHPTPENAAGSSEQPLPPGPSWGPRPSLSGSGDGR PPPLLQWPPPRLPGPPPASPAPTEGPRPSRPSGPALLNSEGPSGKWSLGGRKGLGGPDGEPASGSPKGGT PKSQAPLDLSLSPDVSSEASPARTTQDLPCLDSSIPEGCTPSGAPGDWPVPAEERESPAAQPLLEHQY
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