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Report for CCDS82149.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
82149.1 |
Public |
Homo sapiens |
17 |
NPEPPS |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:9520](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:82149.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:9520](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 17 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 82149.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000530173.6 |
ENSP00000433287.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000530173.6](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000433287.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000530173](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000433287](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001330257.2 |
NP_001317186.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001330257.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001317186.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001330257](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001317186](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001317186.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 82149.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (2748 nt): ATGGCATCATTTTCCATGGATTGCTCTCCAAGTTTTTGTGTTCCTGGCCTTTGGAACCCCTTCATCATAT TCCGCAGCCGCTCCTCTCGCCGCCGCCTCCACAGCCTGGGCCTCGCCGCGATGCCGGAGAAGAGGCCCTT CGAGCGGCTGCCTGCCGATGTCTCCCCCATCAACTACAGCCTTTGCCTCAAGCCCGACTTGCTGGACTTC ACCTTCGAGGGCAAGCTGGAGGCCGCCGCCCAGGTGAGGCAGGCGACTAATCAGATTGTGATGAATTGTG CTGATATTGATATTATTACAGCTTCATATGCACCAGAAGGAGATGAAGAAATACATGCTACAGGATTTAA CTATCAGAATGAAGATGAAAAAGTCACCTTGTCTTTCCCTAGTACTCTGCAAACAGGTACGGGAACCTTA AAGATAGATTTTGTTGGAGAGCTGAATGACAAAATGAAAGGTTTCTATAGAAGTAAATATACTACCCCTT CTGGAGAGGTGCGCTATGCTGCTGTAACACAGTTTGAGGCTACTGATGCCCGAAGGGCTTTTCCTTGCTG GGATGAGCCTGCTATCAAAGCAACTTTTGATATCTCATTGGTTGTTCCTAAAGACAGAGTAGCTTTATCA AACATGAATGTAATTGACCGGAAACCATACCCTGATGATGAAAATTTAGTGGAAGTGAAGTTTGCCCGCA CACCTGTTATGTCTACATATCTGGTGGCATTTGTTGTGGGTGAATATGACTTTGTAGAAACAAGGTCAAA AGATGGTGTGTGTGTCCGTGTTTACACTCCTGTTGGCAAAGCAGAGCAAGGAAAATTTGCGTTAGAGGTT GCTGCTAAAACCTTGCCTTTTTATAAGGACTACTTCAATGTTCCTTATCCTCTACCTAAAATTGATCTCA TTGCTATTGCAGACTTTGCAGCTGGTGCCATGGAGAACTGGGGCCTTGTTACTTATAGGGAGACTGCATT GCTTATTGATCCAAAAAATTCCTGTTCTTCATCCCGCCAGTGGGTTGCTCTGGTTGTGGGACATGAACTC GCCCATCAATGGTTTGGAAATCTTGTTACTATGGAATGGTGGACTCATCTTTGGTTAAATGAAGGTTTTG CATCCTGGATTGAATATCTGTGTGTAGACCACTGCTTCCCAGAGTATGATATTTGGACTCAGTTTGTTTC TGCTGATTACACCCGTGCCCAGGAGCTTGACGCCTTAGATAACAGCCATCCTATTGAAGTCAGTGTGGGC CATCCATCTGAGGTTGATGAGATATTTGATGCTATATCATATAGCAAAGGTGCATCTGTCATCCGAATGC TGCATGACTACATTGGGGATAAGGACTTTAAGAAAGGAATGAACATGTATTTAACCAAGTTCCAACAAAA GAATGCTGCCACAGAGGATCTCTGGGAAAGTTTAGAAAATGCTAGTGGTAAACCTATAGCAGCTGTGATG AATACCTGGACCAAACAAATGGGATTTCCCCTCATTTATGTGGAAGCTGAACAGGTAGAAGATGACAGAT TATTGAGGTTGTCCCAAAAGAAGTTCTGTGCTGGTGGGTCATATGTTGGTGAAGATTGTCCCCAGTGGAT GGTCCCTATCACAATCTCTACTAGTGAAGACCCCAACCAGGCCAAACTAAAAATTCTAATGGACAAGCCA GAGATGAATGTGGTTTTGAAAAATGTCAAACCAGACCAATGGGTGAAGTTAAACTTAGGAACAGTTGGGT TTTATCGGACCCAGTACAGCTCTGCCATGCTGGAAAGTTTATTACCAGGCATTCGTGACCTTTCTCTGCC CCCTGTGGATCGACTTGGATTACAGAATGACCTCTTCTCCTTGGCTCGAGCTGGAATCATTAGCACTGTA GAGGTTCTAAAAGTCATGGAGGCTTTTGTGAATGAGCCCAATTATACTGTATGGAGCGACCTGAGCTGTA ACCTGGGGATTCTCTCAACTCTCTTGTCCCACACAGACTTCTATGAGGAAATCCAGGAGTTTGTGAAAGA TGTCTTTTCACCTATAGGGGAGAGACTGGGCTGGGACCCCAAACCTGGAGAAGGTCATCTCGATGCACTC CTGAGGGGCTTGGTTCTGGGAAAACTAGGAAAAGCAGGACATAAGGCAACGTTAGAAGAAGCCCGTCGTC GGTTTAAGGACCACGTGGAAGGAAAACAGATTCTCTCCGCTGATCTGAGGAGTCCTGTCTATCTGACTGT TTTGAAGCATGGTGATGGCACTACTTTAGATATTATGTTAAAACTTCATAAACAAGCAGATATGCAAGAA GAGAAAAACCGAATCGAAAGAGTCCTTGGCGCTACTCTTTTGCCTGACCTGATTCAAAAAGTCCTCACGT TTGCACTTTCAGAAGAGGTACGTCCACAGGACACTGTATCGGTAATTGGTGGAGTAGCTGGAGGCAGCAA GCATGGTAGGAAAGCTGCTTGGAAATTCATAAAGGACAACTGGGAAGAACTTTATAACCGATACCAGGGA GGATTCTTAATATCCAGACTAATAAAGCTATCAGTTGAGGGATTTGCAGTTGATAAAATGGCTGGAGAGG TTAAGGCTTTCTTCGAGAGTCACCCAGCTCCTTCAGCTGAGCGTACCATCCAGCAGTGTTGTGAAAATAT TCTGCTGAATGCTGCCTGGCTAAAGCGAGATGCTGAGAGCATCCACCAGTACCTCCTTCAGCGGAAGGCC TCACCACCCACAGTGTGA
Translation (915 aa): MASFSMDCSPSFCVPGLWNPFIIFRSRSSRRRLHSLGLAAMPEKRPFERLPADVSPINYSLCLKPDLLDF TFEGKLEAAAQVRQATNQIVMNCADIDIITASYAPEGDEEIHATGFNYQNEDEKVTLSFPSTLQTGTGTL KIDFVGELNDKMKGFYRSKYTTPSGEVRYAAVTQFEATDARRAFPCWDEPAIKATFDISLVVPKDRVALS NMNVIDRKPYPDDENLVEVKFARTPVMSTYLVAFVVGEYDFVETRSKDGVCVRVYTPVGKAEQGKFALEV AAKTLPFYKDYFNVPYPLPKIDLIAIADFAAGAMENWGLVTYRETALLIDPKNSCSSSRQWVALVVGHEL AHQWFGNLVTMEWWTHLWLNEGFASWIEYLCVDHCFPEYDIWTQFVSADYTRAQELDALDNSHPIEVSVG HPSEVDEIFDAISYSKGASVIRMLHDYIGDKDFKKGMNMYLTKFQQKNAATEDLWESLENASGKPIAAVM NTWTKQMGFPLIYVEAEQVEDDRLLRLSQKKFCAGGSYVGEDCPQWMVPITISTSEDPNQAKLKILMDKP EMNVVLKNVKPDQWVKLNLGTVGFYRTQYSSAMLESLLPGIRDLSLPPVDRLGLQNDLFSLARAGIISTV EVLKVMEAFVNEPNYTVWSDLSCNLGILSTLLSHTDFYEEIQEFVKDVFSPIGERLGWDPKPGEGHLDAL LRGLVLGKLGKAGHKATLEEARRRFKDHVEGKQILSADLRSPVYLTVLKHGDGTTLDIMLKLHKQADMQE EKNRIERVLGATLLPDLIQKVLTFALSEEVRPQDTVSVIGGVAGGSKHGRKAAWKFIKDNWEELYNRYQG GFLISRLIKLSVEGFAVDKMAGEVKAFFESHPAPSAERTIQQCCENILLNAAWLKRDAESIHQYLLQRKA SPPTV
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