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Report for CCDS23184.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23184.1 Public Mus musculus 9 Acat1 23 108 98 CCDS HistoryNCBI Gene:110446Re-query CCDS DB by CCDS ID:23184.1See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 23184.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000034547.5 ENSMUSP00000034547.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000034547.5Link to Ensembl Protein Viewer:ENSMUSP00000034547.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000034547Re-query CCDS DB by Protein ID:ENSMUSP00000034547
Original member Current member NCBI NM_144784.3 NP_659033.1 Accepted alive Link to Nucleotide Sequence:NM_144784.3Link to Protein Sequence:NP_659033.1Re-query CCDS DB by Nucleotide ID:NM_144784Re-query CCDS DB by Protein ID:NP_659033Link to BLAST:NP_659033.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_659033.1 424 Q8QZT1 424 100% 0 0

Chromosomal Locations for CCDS 23184.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 53582545 53582665 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 53583437 53583594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 53584840 53584904 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 53587453 53587566 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 53589178 53589273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 53591307 53591457 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 53591968 53592111 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 53594406 53594506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 53594694 53594789 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 53595283 53595400 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 53598085 53598132 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 53610213 53610275 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1275 nt):
ATGGCTGCCCTGGTGGCTCTGCACGGCGTCGTCCGCAGGCCTCTGCTTCGCGGGCTGCTGCAGGAAGTAA
GATGCCTGGAACGAAGTTATGCATCCAAACCCACTTTGAATGAAGTGGTTATAGTAAGTGCTATAAGAAC
TCCCATTGGATCCTTCCTGGGCAGCCTTGCCTCTCAGCCGGCCACTAAACTTGGTACTGCTGCAATTCAG
GGAGCCATTGAGAAGGCAGGGATTCCAAAAGAAGAAGTGAAGGAAGTCTACATGGGCAATGTCATCCAAG
GGGGTGAAGGACAGGCCCCTACCAGGCAAGCAACACTGGGCGCAGGTTTACCTATTTCCACTCCATGCAC
CACAGTAAACAAGGTTTGTGCTTCAGGAATGAAAGCCATCATGATGGCCTCTCAAAGTCTTATGTGTGGA
CATCAGGATGTGATGGTGGCAGGCGGGATGGAGAGCATGTCCAATGTCCCATACGTAATGAGCAGAGGAG
CAACACCATATGGTGGGGTAAAACTTGAAGACCTGATTGTAAAAGACGGGCTAACTGATGTCTACAATAA
AATTCATATGGGTAACTGTGCTGAGAATACTGCAAAGAAGATGAATATCTCACGGCAGGAACAGGATACG
TACGCTCTCAGCTCTTACACCAGAAGTAAAGAAGCGTGGGACGCAGGGAAGTTTGCCAGTGAGATTACTC
CCATCACCATCTCAGTGAAAGGTAAACCAGATGTGGTGGTGAAAGAAGATGAAGAATACAAGCGTGTTGA
CTTTAGTAAAGTGCCAAAGCTCAAGACCGTGTTCCAGAAAGAAAATGGCACAATAACAGCTGCCAATGCC
AGCACACTGAACGATGGAGCAGCTGCTCTGGTTCTCATGACTGCAGAGGCAGCCCAGAGGCTCAATGTTA
AGCCATTGGCACGAATTGCAGCATTTGCTGATGCTGCCGTAGACCCCATTGATTTTCCACTTGCGCCTGC
ATATGCCGTACCTAAGGTTCTTAAATATGCAGGACTGAAAAAAGAAGACATTGCCATGTGGGAAGTAAAT
GAAGCATTCAGTGTGGTTGTGCTAGCCAACATTAAAATGCTGGAGATTGACCCCCAAAAAGTAAATATCC
ACGGAGGAGCTGTTTCTCTGGGCCATCCAATTGGGATGTCTGGAGCCCGGATTGTTGTTCATATGGCTCA
TGCCCTGAAGCCAGGAGAGTTCGGTCTGGCTAGTATTTGCAACGGAGGAGGAGGTGCTTCCGCCCTGCTG
ATTGAGAAGCTGTAG

Translation (424 aa):
MAALVALHGVVRRPLLRGLLQEVRCLERSYASKPTLNEVVIVSAIRTPIGSFLGSLASQPATKLGTAAIQ
GAIEKAGIPKEEVKEVYMGNVIQGGEGQAPTRQATLGAGLPISTPCTTVNKVCASGMKAIMMASQSLMCG
HQDVMVAGGMESMSNVPYVMSRGATPYGGVKLEDLIVKDGLTDVYNKIHMGNCAENTAKKMNISRQEQDT
YALSSYTRSKEAWDAGKFASEITPITISVKGKPDVVVKEDEEYKRVDFSKVPKLKTVFQKENGTITAANA
STLNDGAAALVLMTAEAAQRLNVKPLARIAAFADAAVDPIDFPLAPAYAVPKVLKYAGLKKEDIAMWEVN
EAFSVVVLANIKMLEIDPQKVNIHGGAVSLGHPIGMSGARIVVHMAHALKPGEFGLASICNGGGGASALL
IEKL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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