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Report for CCDS10348.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10348.1 Public Homo sapiens 15 ABHD2 24 110 108 CCDS HistoryNCBI Gene:11057Re-query CCDS DB by CCDS ID:10348.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10348.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000352732.10 ENSP00000268129.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000352732.10Link to Ensembl Protein Viewer:ENSP00000268129.5Re-query CCDS DB by Nucleotide ID:ENST00000352732Re-query CCDS DB by Protein ID:ENSP00000268129
Original member Current member EBI ENST00000565973.5 ENSP00000455639.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000565973.5Link to Ensembl Protein Viewer:ENSP00000455639.1Re-query CCDS DB by Nucleotide ID:ENST00000565973Re-query CCDS DB by Protein ID:ENSP00000455639
Original member Current member NCBI NM_007011.8 NP_008942.3 Accepted alive Link to Nucleotide Sequence:NM_007011.8Link to Protein Sequence:NP_008942.3Re-query CCDS DB by Nucleotide ID:NM_007011Re-query CCDS DB by Protein ID:NP_008942Link to BLAST:NP_008942.3
Original member Current member NCBI NM_152924.5 NP_690888.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152924.5Link to Protein Sequence:NP_690888.1Re-query CCDS DB by Nucleotide ID:NM_152924Re-query CCDS DB by Protein ID:NP_690888Link to BLAST:NP_690888.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_008942.3 425 P08910 425 100% 0 0
NP_690888.1 425 P08910 425 100% 0 0

Chromosomal Locations for CCDS 10348.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 89116328 89116521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89151677 89151852 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89155367 89155534 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89175812 89175995 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89185424 89185516 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89188193 89188303 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89191080 89191149 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89193235 89193319 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89195227 89195423 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1278 nt):
ATGAATGCCATGCTGGAGACTCCCGAACTCCCAGCCGTGTTTGATGGAGTGAAGCTGGCTGCAGTGGCTG
CTGTGCTGTACGTGATCGTCCGGTGTTTGAACCTGAAGAGCCCCACAGCCCCACCTGACCTCTACTTCCA
GGACTCGGGGCTCTCACGCTTTCTGCTCAAGTCCTGTCCTCTTCTGACCAAAGAATACATTCCACCGTTG
ATCTGGGGGAAAAGTGGACACATCCAGACAGCCTTGTATGGGAAGATGGGAAGGGTGAGGTCGCCACATC
CTTATGGGCACCGGAAGTTCATCACTATGTCTGATGGAGCCACTTCTACATTCGACCTCTTCGAGCCCTT
GGCTGAGCACTGTGTTGGAGATGATATCACCATGGTCATCTGCCCTGGAATTGCCAATCACAGCGAGAAG
CAATACATCCGCACTTTCGTTGACTACGCCCAGAAAAATGGCTATCGGTGCGCCGTGCTGAACCACCTGG
GTGCCCTGCCCAACATTGAATTGACCTCGCCACGCATGTTCACCTATGGCTGCACGTGGGAATTTGGAGC
CATGGTGAACTACATCAAGAAGACATATCCCCTGACCCAGCTGGTCGTCGTGGGCTTCAGCCTGGGTGGT
AACATTGTGTGCAAATACTTGGGGGAGACTCAGGCAAACCAAGAGAAGGTCCTGTGCTGCGTCAGCGTGT
GCCAGGGGTACAGTGCACTGAGGGCCCAGGAAACCTTCATGCAATGGGATCAGTGCCGGCGGTTCTACAA
CTTCCTCATGGCTGACAACATGAAGAAGATCATCCTCTCGCACAGGCAAGCTCTTTTTGGAGACCATGTT
AAGAAACCCCAGAGCCTGGAAGACACGGACTTGAGCCGGCTCTACACAGCAACATCCCTGATGCAGATTG
ATGACAATGTGATGAGGAAGTTTCACGGCTATAACTCCCTGAAGGAATACTATGAGGAAGAAAGTTGCAT
GCGGTACCTGCACAGGATTTATGTTCCTCTCATGCTGGTTAATGCAGCTGACGATCCGTTGGTGCATGAA
AGTCTTCTAACCATTCCAAAATCTCTTTCAGAGAAACGAGAGAACGTCATGTTTGTGCTGCCTCTGCATG
GGGGCCACTTGGGCTTCTTTGAGGGCTCTGTGCTGTTCCCCGAGCCCCTGACATGGATGGATAAGCTGGT
GGTGGAGTACGCCAACGCCATTTGCCAATGGGAGCGTAACAAGTTGCAGTGCTCTGACACGGAGCAGGTG
GAGGCCGACCTGGAGTGA

Translation (425 aa):
MNAMLETPELPAVFDGVKLAAVAAVLYVIVRCLNLKSPTAPPDLYFQDSGLSRFLLKSCPLLTKEYIPPL
IWGKSGHIQTALYGKMGRVRSPHPYGHRKFITMSDGATSTFDLFEPLAEHCVGDDITMVICPGIANHSEK
QYIRTFVDYAQKNGYRCAVLNHLGALPNIELTSPRMFTYGCTWEFGAMVNYIKKTYPLTQLVVVGFSLGG
NIVCKYLGETQANQEKVLCCVSVCQGYSALRAQETFMQWDQCRRFYNFLMADNMKKIILSHRQALFGDHV
KKPQSLEDTDLSRLYTATSLMQIDDNVMRKFHGYNSLKEYYEEESCMRYLHRIYVPLMLVNAADDPLVHE
SLLTIPKSLSEKRENVMFVLPLHGGHLGFFEGSVLFPEPLTWMDKLVVEYANAICQWERNKLQCSDTEQV
EADLE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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