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Report for CCDS9759.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9759.1 Public Homo sapiens 14 WDR89 24 110 108 CCDS HistoryNCBI Gene:112840Re-query CCDS DB by CCDS ID:9759.1See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 9759.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000267522.7 ENSP00000267522.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000267522.7Link to Ensembl Protein Viewer:ENSP00000267522.3Re-query CCDS DB by Nucleotide ID:ENST00000267522Re-query CCDS DB by Protein ID:ENSP00000267522
Original member Current member EBI ENST00000394942.2 ENSP00000378399.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000394942.2Link to Ensembl Protein Viewer:ENSP00000378399.2Re-query CCDS DB by Nucleotide ID:ENST00000394942Re-query CCDS DB by Protein ID:ENSP00000378399
Original member Current member EBI ENST00000620954.2 ENSP00000480112.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000620954.2Link to Ensembl Protein Viewer:ENSP00000480112.1Re-query CCDS DB by Nucleotide ID:ENST00000620954Re-query CCDS DB by Protein ID:ENSP00000480112
Original member Current member NCBI NM_001008726.3 NP_001008726.1 Accepted alive Link to Nucleotide Sequence:NM_001008726.3Link to Protein Sequence:NP_001008726.1Re-query CCDS DB by Nucleotide ID:NM_001008726Re-query CCDS DB by Protein ID:NP_001008726Link to BLAST:NP_001008726.1
Original member Current member NCBI NM_001258272.2 NP_001245201.1 Accepted alive Link to Nucleotide Sequence:NM_001258272.2Link to Protein Sequence:NP_001245201.1Re-query CCDS DB by Nucleotide ID:NM_001258272Re-query CCDS DB by Protein ID:NP_001245201Link to BLAST:NP_001245201.1
Original member Current member NCBI NM_001382423.1 NP_001369352.1 Accepted alive Link to Nucleotide Sequence:NM_001382423.1Link to Protein Sequence:NP_001369352.1Re-query CCDS DB by Nucleotide ID:NM_001382423Re-query CCDS DB by Protein ID:NP_001369352Link to BLAST:NP_001369352.1
Original member Current member NCBI NM_001382424.1 NP_001369353.1 Accepted alive Link to Nucleotide Sequence:NM_001382424.1Link to Protein Sequence:NP_001369353.1Re-query CCDS DB by Nucleotide ID:NM_001382424Re-query CCDS DB by Protein ID:NP_001369353Link to BLAST:NP_001369353.1
Original member Current member NCBI NM_001382425.1 NP_001369354.1 Accepted alive Link to Nucleotide Sequence:NM_001382425.1Link to Protein Sequence:NP_001369354.1Re-query CCDS DB by Nucleotide ID:NM_001382425Re-query CCDS DB by Protein ID:NP_001369354Link to BLAST:NP_001369354.1
Original member Current member NCBI NM_001382426.1 NP_001369355.1 Accepted alive Link to Nucleotide Sequence:NM_001382426.1Link to Protein Sequence:NP_001369355.1Re-query CCDS DB by Nucleotide ID:NM_001382426Re-query CCDS DB by Protein ID:NP_001369355Link to BLAST:NP_001369355.1
Original member Current member NCBI NM_001382427.1 NP_001369356.1 Accepted alive Link to Nucleotide Sequence:NM_001382427.1Link to Protein Sequence:NP_001369356.1Re-query CCDS DB by Nucleotide ID:NM_001382427Re-query CCDS DB by Protein ID:NP_001369356Link to BLAST:NP_001369356.1
Original member Current member NCBI NM_001382428.1 NP_001369357.1 Accepted alive Link to Nucleotide Sequence:NM_001382428.1Link to Protein Sequence:NP_001369357.1Re-query CCDS DB by Nucleotide ID:NM_001382428Re-query CCDS DB by Protein ID:NP_001369357Link to BLAST:NP_001369357.1
Original member Current member NCBI NM_001382429.1 NP_001369358.1 Accepted alive Link to Nucleotide Sequence:NM_001382429.1Link to Protein Sequence:NP_001369358.1Re-query CCDS DB by Nucleotide ID:NM_001382429Re-query CCDS DB by Protein ID:NP_001369358Link to BLAST:NP_001369358.1
Original member Current member NCBI NM_080666.4 NP_542397.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_080666.4Link to Protein Sequence:NP_542397.1Re-query CCDS DB by Nucleotide ID:NM_080666Re-query CCDS DB by Protein ID:NP_542397Link to BLAST:NP_542397.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001008726.1 387 Q96FK6 387 100% 0 0
NP_001245201.1 387 Q96FK6 387 100% 0 0
NP_001369352.1 387 Q96FK6 387 100% 0 0
NP_001369353.1 387 Q96FK6 387 100% 0 0
NP_001369354.1 387 Q96FK6 387 100% 0 0
NP_001369355.1 387 Q96FK6 387 100% 0 0
NP_001369356.1 387 Q96FK6 387 100% 0 0
NP_001369357.1 387 Q96FK6 387 100% 0 0
NP_001369358.1 387 Q96FK6 387 100% 0 0
NP_542397.1 387 Q96FK6 387 100% 0 0

Chromosomal Locations for CCDS 9759.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 63598779 63599942 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1164 nt):
ATGGAAAAGATTGAGGAACAATTTGCTAATCTGCACATTGTTAAATGTTCCTTAGGAACCAAAGAGCCCA
CTTACCTTCTTGGTATAGACACATCAAAGACTGTCCAAGCAGGAAAGGAAAACTTGGTTGCTGTTTTATG
TTCTAATGGATCAATCAGAATATATGATAAAGAAAGGTTAAATGTACTACGAGAATTTAGTGGATATCCT
GGACTTCTTAATGGAGTCAGATTTGCAAATTCCTGTGACAGTGTATATTCAGCATGTACTGATGGCACTG
TGAAATGCTGGGATGCTCGAGTAGCCAGAGAAAAACCTGTTCAGCTCTTCAAGGGTTACCCTTCCAATAT
TTTTATCAGTTTTGATATTAATTGTAATGATCATATTATTTGTGCTGGTACAGAAAAAGTTGATGATGAT
GCATTGTTGGTGTTTTGGGATGCAAGGATGAATTCTCAGAATTTATCTACAACTAAAGACTCACTTGGTG
CATATTCAGAGACACATAGTGATGATGTCACTCAAGTACGTTTCCATCCCAGCAATCCCAACATGGTAGT
CTCAGGTTCATCTGATGGCCTGGTAAATGTATTTGATATTAATATTGATAATGAGGAGGATGCACTGGTT
ACAACCTGTAACTCAATTTCATCAGTAAGCTGTATTGGTTGGTCTGGGAAAGGTTATAAACAGATTTACT
GCATGACACATGATGAAGGATTTTATTGGTGGGATCTTAATCATCTGGACACTGATGAACCAGTTACACG
TTTGAACATCCAGGATGTCAGAGAAGTAGTTAACATGAAAGAAGATGCTTTGGACTATTTGATTGGTGGC
CTATATCATGAAAAGACAGACACATTGCATGTTATTGGAGGAACAAACAAAGGAAGGATTCATTTGATGA
ACTGCAGCATGTCAGGACTGACCCATGTGACTAGCCTTCAGGGAGGGCATGCTGCTACAGTCCGTTCTTT
CTGTTGGAATGTGCAAGATGATTCTTTGTTGACTGGAGGAGAAGATGCACAGTTGTTACTTTGGAAACCT
GGAGCTATAGAGAAGACCTTTACAAAGAAAGAGAGTATGAAAATAGCATCCTCTGTGCACCAACGAGTAC
GAGTTCATAGTAATGATTCTTATAAAAGAAGGAAAAAGCAGTGA

Translation (387 aa):
MEKIEEQFANLHIVKCSLGTKEPTYLLGIDTSKTVQAGKENLVAVLCSNGSIRIYDKERLNVLREFSGYP
GLLNGVRFANSCDSVYSACTDGTVKCWDARVAREKPVQLFKGYPSNIFISFDINCNDHIICAGTEKVDDD
ALLVFWDARMNSQNLSTTKDSLGAYSETHSDDVTQVRFHPSNPNMVVSGSSDGLVNVFDINIDNEEDALV
TTCNSISSVSCIGWSGKGYKQIYCMTHDEGFYWWDLNHLDTDEPVTRLNIQDVREVVNMKEDALDYLIGG
LYHEKTDTLHVIGGTNKGRIHLMNCSMSGLTHVTSLQGGHAATVRSFCWNVQDDSLLTGGEDAQLLLWKP
GAIEKTFTKKESMKIASSVHQRVRVHSNDSYKRRKKQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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