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Report for CCDS10031.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10031.1 Public Homo sapiens 15 CHRM5 24 110 108 CCDS HistoryNCBI Gene:1133Re-query CCDS DB by CCDS ID:10031.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10031.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000383263.7 ENSP00000372750.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000383263.7Link to Ensembl Protein Viewer:ENSP00000372750.5Re-query CCDS DB by Nucleotide ID:ENST00000383263Re-query CCDS DB by Protein ID:ENSP00000372750
Original member Current member EBI ENST00000557872.1 ENSP00000453745.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000557872.1Link to Ensembl Protein Viewer:ENSP00000453745.1Re-query CCDS DB by Nucleotide ID:ENST00000557872Re-query CCDS DB by Protein ID:ENSP00000453745
Original member Current member NCBI NM_001320917.2 NP_001307846.1 Accepted alive Link to Nucleotide Sequence:NM_001320917.2Link to Protein Sequence:NP_001307846.1Re-query CCDS DB by Nucleotide ID:NM_001320917Re-query CCDS DB by Protein ID:NP_001307846Link to BLAST:NP_001307846.1
Original member Current member NCBI NM_012125.4 NP_036257.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_012125.4Link to Protein Sequence:NP_036257.1Re-query CCDS DB by Nucleotide ID:NM_012125Re-query CCDS DB by Protein ID:NP_036257Link to BLAST:NP_036257.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001307846.1 532 P08912 532 100% 0 0
NP_036257.1 532 P08912 532 100% 0 0

Chromosomal Locations for CCDS 10031.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 34062718 34064316 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1599 nt):
ATGGAAGGGGATTCTTACCACAATGCAACCACCGTCAATGGCACCCCAGTAAATCACCAGCCTTTGGAAC
GCCACAGGTTGTGGGAAGTCATCACCATTGCAGCTGTGACTGCTGTGGTAAGCCTGATCACCATTGTGGG
CAATGTCTTGGTCATGATCTCCTTCAAAGTCAACAGCCAGCTCAAGACAGTTAACAACTATTACCTGCTC
AGCTTAGCCTGTGCAGATCTCATCATTGGAATCTTCTCCATGAACCTCTACACCACCTACATCCTCATGG
GACGCTGGGCTCTCGGGAGTCTGGCTTGTGACCTTTGGCTTGCACTGGACTACGTGGCCAGCAACGCTTC
TGTCATGAACCTTCTGGTGATCAGTTTTGACCGTTACTTTTCCATCACAAGACCCTTGACATATCGGGCC
AAGCGTACTCCGAAAAGGGCTGGCATCATGATTGGCTTGGCCTGGCTGATCTCCTTCATCCTCTGGGCCC
CAGCAATCCTCTGCTGGCAGTACTTGGTTGGGAAGCGGACAGTTCCACTGGATGAGTGCCAGATCCAGTT
TCTCTCTGAGCCCACCATCACTTTTGGCACTGCCATTGCTGCCTTCTACATCCCTGTTTCTGTCATGACC
ATCCTCTACTGTCGAATCTACCGGGAAACAGAGAAGCGAACCAAGGACCTGGCTGACCTCCAGGGTTCTG
ACTCTGTGACCAAAGCTGAGAAGAGAAAGCCAGCTCATAGGGCTCTGTTCAGATCCTGCTTGCGCTGTCC
TCGACCCACCCTGGCCCAGCGGGAAAGGAACCAGGCCTCCTGGTCATCCTCCCGCAGGAGCACCTCCACC
ACTGGGAAGCCATCCCAAGCCACTGGCCCAAGCGCCAATTGGGCCAAAGCTGAGCAGCTCACCACCTGTA
GCAGCTACCCTTCCTCAGAGGATGAGGACAAGCCCGCCACTGACCCTGTCCTCCAAGTGGTCTACAAGAG
TCAGGGTAAGGAAAGCCCAGGGGAAGAATTCAGTGCTGAAGAGACTGAGGAAACTTTTGTGAAAGCTGAA
ACTGAAAAAAGTGACTATGACACCCCAAACTACCTTCTGTCTCCAGCAGCTGCTCATAGACCCAAGAGTC
AGAAATGTGTGGCCTATAAGTTCCGATTGGTGGTAAAAGCTGACGGGAACCAGGAGACCAACAATGGCTG
TCACAAGGTGAAAATCATGCCCTGCCCCTTCCCAGTGGCCAAGGAACCTTCAACGAAAGGCCTCAATCCC
AACCCCAGCCATCAAATGACCAAACGAAAGAGAGTGGTCCTAGTCAAAGAGAGGAAAGCAGCCCAGACAC
TGAGTGCCATTCTCCTGGCCTTCATCATCACATGGACCCCGTATAACATCATGGTCCTGGTTTCTACCTT
CTGTGACAAGTGTGTCCCAGTCACCCTGTGGCACTTGGGCTATTGGTTGTGCTATGTCAATAGCACTGTC
AACCCCATCTGCTATGCCCTCTGCAACAGAACCTTCAGGAAGACCTTTAAGATGCTGCTTCTCTGCCGAT
GGAAAAAGAAAAAAGTGGAAGAGAAGTTGTACTGGCAGGGGAACAGCAAGCTACCCTGA

Translation (532 aa):
MEGDSYHNATTVNGTPVNHQPLERHRLWEVITIAAVTAVVSLITIVGNVLVMISFKVNSQLKTVNNYYLL
SLACADLIIGIFSMNLYTTYILMGRWALGSLACDLWLALDYVASNASVMNLLVISFDRYFSITRPLTYRA
KRTPKRAGIMIGLAWLISFILWAPAILCWQYLVGKRTVPLDECQIQFLSEPTITFGTAIAAFYIPVSVMT
ILYCRIYRETEKRTKDLADLQGSDSVTKAEKRKPAHRALFRSCLRCPRPTLAQRERNQASWSSSRRSTST
TGKPSQATGPSANWAKAEQLTTCSSYPSSEDEDKPATDPVLQVVYKSQGKESPGEEFSAEETEETFVKAE
TEKSDYDTPNYLLSPAAAHRPKSQKCVAYKFRLVVKADGNQETNNGCHKVKIMPCPFPVAKEPSTKGLNP
NPSHQMTKRKRVVLVKERKAAQTLSAILLAFIITWTPYNIMVLVSTFCDKCVPVTLWHLGYWLCYVNSTV
NPICYALCNRTFRKTFKMLLLCRWKKKKVEEKLYWQGNSKLP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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