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Report for CCDS14097.3 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14097.3 Public Homo sapiens 22 KLHDC7B 24 110 108 CCDS HistoryNCBI Gene:113730Re-query CCDS DB by CCDS ID:14097.3See the combined annotation on chromosome 22 in Sequence Viewer

Public Note for CCDS 14097.2
The coding region has been updated to start at an alternate in-frame start codon that is more supported by conservation data.

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 14097.3

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000648057.3 ENSP00000497256.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000648057.3Link to Ensembl Protein Viewer:ENSP00000497256.1Re-query CCDS DB by Nucleotide ID:ENST00000648057Re-query CCDS DB by Protein ID:ENSP00000497256
Original member Current member NCBI NM_138433.5 NP_612442.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_138433.5Link to Protein Sequence:NP_612442.3Re-query CCDS DB by Nucleotide ID:NM_138433Re-query CCDS DB by Protein ID:NP_612442Link to BLAST:NP_612442.3

Chromosomal Locations for CCDS 14097.3

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 50546244 50549951 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3708 nt):
ATGATCCAGGGCACCTTGGAGCCAGATGGTCCCCTCTGGGGCTGGGACTGGGACAGTGACAATGACTGGG
AT
AGTGCTGTGCTGGCCCTCCTGGCGCTGGCTGTGGTGGCTGCCACAGCGCTGGCCTTACACTGGTTTGG
C
TCCGGGCACGATCAAGAGGCGGCAGAACCGGTGTCCACAGCCCTCGGGGCTCAACCTCATCAGGCAGGA
GGA
GCTGAGCTGGCCCTGCAACCGAAGTCTAAGGTCAGTGATGGCAGCGAGGGGCAGAGCCCAGGGCAGG
GG
AAACCAGAGCCCCCAGGACGCGGCCAGCAGAGCCCTGTCCCTGCTGCAGCGCCGGGCGGGGGCCTGGC
C
GCCATGGCCCGGCTTCCACTCAAGACGGCTGTCGAGGAGGCCCGCAGAGAGGCATTAGGACAGCAACGG
GGC
AGTGCCACCCCCGCGGCCCCCCGAGCGGAAGGAAAGGAGCCTCCCAGGCCAGGCACTGCCCTCCTGG
GC
AGGAGCGAAGCAGGGGGGATGTCCGCCCCCCTCCTGATCCACTTCACTCCTCGGAGCCCTGGCAGCGA
A
GCGGAGGCGGAGACAGGTGGTGTCAGGGCGTCCTCTCGCCAGGCCGCAGGCCCCGCGGGGCAACAGGAC
ACT
GGCCCCTGGCAGGCGGGCGCGGGGCCCTCGGGCTCGATGGGGAGAGGCCGGGGCCGGCGGCGGCGGA
TG
GACGCTGGCTCGGGAGACAGAGCCCGCCGCCCCCGGAAACTGGACCCGCTCCGCCTGGGCGCCGCGGG
G
AGCGTGTGGGACGCGGTGGACGGGGCCGCCGCCCTGGACGCCCACGCGCGCGGCCTCCCCACAGGACCC
CCA
CTCGCCCAGGAGCCCGCACTCCCGGCGCTGCCCGCTCCCCGCGCCCTGCAGCCTGGGTCTCAGACGG
AA
GGCTCTGGGGCCAAGGGTGGCTGGAGCAGGGAGGCCTCGGGGGTCCCTGCCCCCGGAGGAGGCTGGCC
C
TGGGTCAGCAGGGAGGTCCCGGGCACCCGGAGCTTTGGCCCAGCCCCAGACTCCACGCGCCCCTGGCTA
GAG
AGTCCGCCTCAAGGTCGCCCACTCTCGTCCCAAGGGCCGGGTGCCACAGGGGCCTACGATGCCGGCG
AG
GCCGGGGCTGACAGCTCCCGAGATAACAGTCCTGCCGCTGACCTGGGGCCCACCCGGCCCCCGGAGCA
A
GCAAAGCCGGCTGCAGCCGGCCACAGCCGCGCGCCCTCCCGGAGCCGTGAGCCTCGCCCGCGCTCCGCC
TCC
CCGCCCGCAGCTCCCGGCCCGGGGTTCCCACCTGAAGCCCTGACTCTCCCCTCTCCTTCAGACTTTT
TG
CCCCTGGAGGTTACCCAGGATCCTTCCGTGGGCGAAAATCTCAGAGCGGCGCCAGCCCCAAGTTCAGC
C
TCAGCCCAAGTCTTAACTTCAGCTCCAGCCTCAGTCCTAGCCCCAGCCCTGGCTTCATCCCCCAGCTCA
GCA
CCAACCTCAGCCACCACCTCAACCTCATCCCCCACCTCAGCCCCAGCCCCAGCTCCAACCTCAGCTC
CA
ACTTCAACCCCAGCCCCAGCCCCAAGTCCAGCTGCAGCCGCAACTCCAGCCCCAGCCCCAGTCCCAGT
C
CCAACCCTCACACCCCCATCCCCAGCCCTAACCCCAGTCCCAACCCCAGCCCTAAGCCCAGCTCCAACT
CCA
GCCCTAACCCCAGCCGCATCCCCAGCCCTAACCCCAGTCCCAACCCCAGCCCTAAGCCCAGCTCCAA
CT
CCAGCCCCAACCCCAGCCGCATCCCCTGCCCCAGCCCCCACCTCAGCCCCAACCCCAACCCCAGCCGC
A
TCCCCTGCCCCAGCTGACGGGTCAAAGCCTCAGGAGAGTGTGGCTCTCCCCAGGCGCTACCAGGAGGGG
CAG
GTCTCAGCCAGCTGGGGAAACCTTATTGCCATGGTTCTTAGAAGCCACCCCTTCCCCAGGCAAGACA
GG
CCCCAAGGGAGTGTCCCGAGGGCGGTTCCCGGGAGCCCCGTGGGTCCCAGCACTTCCACACACTCTGA
G
GACAGACACGGCCCCTCTTCTTCAGTGGGGACAGTCATAGGGACAGGTACAGGGGGCCTGGTTGAGGCT
GGA
GGTCAGCCACAGCCAAGAAGCTCCGAGACCAACGGATCGCCCAGCCCAGACCCTCCCCCAGGCCTAA
GA
GGAGAGGGAACCAGGGAGAAAAGTCTAGACCCGCTGCCCCAAGCCGCGATGCCCAGGGGCCCCGCACA
G
CCCCCCGCGCAGAGGCCGCCTGGCCCCGCGGCCTCCTCCTCTGCGAGGCGCTCACAGCCGGTACCCCAG
CTA
CGGAAACGCAGCAGGTGCGAAATCGCCCCGAGCTCGGAGCAGGAGGTCAGGCCGGCCGCCTCGGGGG
AC
CCTCAAGGGGAGGCGCCGGGGGAGGGGGGCAGCCCTGCCGGCCGCAGCGGGGCGCTCACGGAAAAGCA
G
GAGGAGGCCCGGAAGCTCATGGTGTTTCTGCAGAGGCCCGGGGGTTGGGGGGTGGTGGAGGGGCCCCGG
AAG
CCCAGCTCCCGGGCCCTGGAGCCCGCCACGGCGGCAGCCCTGCGGCGGCGGCTGGACCTGGGCAGTT
GC
CTGGACGTGCTGGCCTTTGCCCAGCAGCACGGAGAGCCCGGCCTGGCGCAGGAGACCTACGCGCTGAT
G
AGCGACAACCTGCTGCGAGTGCTGGGAGACCCGTGCCTCTACCGCCGGCTGAGCGCGGCCGACCGCGAG
CGC
ATCCTCAGCCTGCGGACCGGCCGGGGCCGGGCGGTGCTGGGCGTCCTCGTACTGCCCAGCCTCTACC
AG
GGGGGCCGCTCAGGGCTCCCCAGGGGCCCTCGTGGCGAGGAGCCTCCTGCGGCGGCCCCTGTGTCCCT
G
CCTCTACCTGCGCACCTGCATGTGTTCAACCCCCGGGAGAACACCTGGCGGCCCCTGACCCAGGTGCCC
GAG
GAGGCCCCGCTTCGGGGCTGCGGTCTCTGCACCATGCACAACTACCTGTTTCTGGCGGGGGGCATCC
GT
GGCTCCGGTGCCAAGGCCGTCTGCTCCAACGAGGTCTTCTGCTACAACCCTCTGACCAACATCTGGAG
C
CAGGTTCGGCCCATGCAGCAGGCCCGAGCCCAGCTCAAGCTGGTGGCCCTGGACGGGCTGCTCTATGCC
ATC
GGTGGCGAATGCCTGTACAGCATGGAGTGCTACGACCCGCGAACAGACGCCTGGACCCCACGCGCGC
CA
CTCCCCGCAGGCACCTTCCCTGTGGCCCACGAGGCTGTGGCCTGCCGTGGGGACATCTACGTCACCGG
G
GGTCACCTCTTCTACCGCCTGCTCAGGTACAGCCCCGTGAAGGATGCTTGGGACGAGTGCCCATACAGT
GCC
AGCCACCGGCGTTCCAGCGACATCGTGGCACTGGGGGGCTTCCTGTACCGCTTCGACCTGCTGCGGG
GC
GTGGGCGCCGCCGTGATGCGCTACAACACAGTGACCGGCTCCTGGAGCAGGGCTGCCTCCCTGCCCCT
G
CCCGCCCCCGCCCCACTGCACTGCACCACCCTGGGCAACACCATTTACTGCCTCAACCCCCAGGTCACT
GCC
ACCTTCACGGTCTCTGGGGGGACTGCCCAGTTCCAGGCCAAGGAGCTGCAGCCCTTCCCCTTGGGGA
GC
ACCGGGGTCCTCAGTCCATTCATCCTGACTCTGCCCCCTGAGGACCGGCTGCAGACCTCACTCTGA


Translation (1235 aa):
MIQGTLEPDGPLWGWDWDSDNDWDSAVLALLALAVVAATALALHWFGSGHDQEAAEPVSTALGAQPHQAG
G
AELALQPKSKVSDGSEGQSPGQGKPEPPGRGQQSPVPAAAPGGGLAAMARLPLKTAVEEARREALGQQR
G
SATPAAPRAEGKEPPRPGTALLGRSEAGGMSAPLLIHFTPRSPGSEAEAETGGVRASSRQAAGPAGQQD
T
GPWQAGAGPSGSMGRGRGRRRRMDAGSGDRARRPRKLDPLRLGAAGSVWDAVDGAAALDAHARGLPTGP
P
LAQEPALPALPAPRALQPGSQTEGSGAKGGWSREASGVPAPGGGWPWVSREVPGTRSFGPAPDSTRPWL
E
SPPQGRPLSSQGPGATGAYDAGEAGADSSRDNSPAADLGPTRPPEQAKPAAAGHSRAPSRSREPRPRSA
S
PPAAPGPGFPPEALTLPSPSDFLPLEVTQDPSVGENLRAAPAPSSASAQVLTSAPASVLAPALASSPSS
A
PTSATTSTSSPTSAPAPAPTSAPTSTPAPAPSPAAAATPAPAPVPVPTLTPPSPALTPVPTPALSPAPT
P
ALTPAASPALTPVPTPALSPAPTPAPTPAASPAPAPTSAPTPTPAASPAPADGSKPQESVALPRRYQEG
Q
VSASWGNLIAMVLRSHPFPRQDRPQGSVPRAVPGSPVGPSTSTHSEDRHGPSSSVGTVIGTGTGGLVEA
G
GQPQPRSSETNGSPSPDPPPGLRGEGTREKSLDPLPQAAMPRGPAQPPAQRPPGPAASSSARRSQPVPQ
L
RKRSRCEIAPSSEQEVRPAASGDPQGEAPGEGGSPAGRSGALTEKQEEARKLMVFLQRPGGWGVVEGPR
K
PSSRALEPATAAALRRRLDLGSCLDVLAFAQQHGEPGLAQETYALMSDNLLRVLGDPCLYRRLSAADRE
R
ILSLRTGRGRAVLGVLVLPSLYQGGRSGLPRGPRGEEPPAAAPVSLPLPAHLHVFNPRENTWRPLTQVP
E
EAPLRGCGLCTMHNYLFLAGGIRGSGAKAVCSNEVFCYNPLTNIWSQVRPMQQARAQLKLVALDGLLYA
I
GGECLYSMECYDPRTDAWTPRAPLPAGTFPVAHEAVACRGDIYVTGGHLFYRLLRYSPVKDAWDECPYS
A
SHRRSSDIVALGGFLYRFDLLRGVGAAVMRYNTVTGSWSRAASLPLPAPAPLHCTTLGNTIYCLNPQVT
A
TFTVSGGTAQFQAKELQPFPLGSTGVLSPFILTLPPEDRLQTSL




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser