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Report for CCDS50063.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
50063.1 Public Mus musculus 17 Zfp563 23 108 98 CCDS HistoryNCBI Gene:240068Re-query CCDS DB by CCDS ID:50063.1Re-query CCDS DB by GeneID:240068See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 50063.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000131722.8 ENSMUSP00000118809.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000131722.8Link to Ensembl Protein Viewer:ENSMUSP00000118809.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000131722Re-query CCDS DB by Protein ID:ENSMUSP00000118809
Original member Current member NCBI NM_001024950.2 NP_001020121.2 Accepted alive Link to Nucleotide Sequence:NM_001024950.2Link to Protein Sequence:NP_001020121.2Re-query CCDS DB by Nucleotide ID:NM_001024950Re-query CCDS DB by Protein ID:NP_001020121Link to BLAST:NP_001020121.2

Chromosomal Locations for CCDS 50063.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 33089477 33089479 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 33102231 33102357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 33102543 33102603 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 33104624 33105779 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1347 nt):
ATGGACTGTCTAACTTTCGAGGATGTGGCTGTGAACTTCACCTTGGAGGAGTGGGATTTACTGGATCCTT
CCCAGAAGCAGCTCTACACAGATGTGATGCAGGAAACCTTCAAAAACCTAATTGCTATAGGACAAATTGA
GGAAGTCCAGAGGAGTAAAGATGTTGATGAAGATTCTAGGAGAAACCTAAGACGTGGACTGGTGGAATTA
TTGTATAAACCCAGTGAAGGCAGACAATGTGACGGAATCTTCAGTGAGTTTCCAGATACTGTTATGAACA
AGAAAACCTCTCATGGAGTAAAACGGTGTGAAAGTAATTTATGTGAAGACATACTTATTGGTCTTCCACC
CCTAAATATGCATATTCCTCTTCAACCAGGACATAAACGATATGAATATGAGGTATATGAAGACAGTCTC
TATAAATTTAGGGAGTGTGGGAAAACCTTCATGTATCCTGAGTGCTATCTGAAACATGGAAATACCCACA
CCATTGAGAAACCGTATAAATGTCATCAATGTGGGAAAGCCTTTTCTTCTTCAAGTAAGGTTCGAAGACA
TGAAAGAACTCATACCGGTGAGAAACCCTACATATGTAACCACTGTGGGAAAGCCTTCCCTAGTCGTGGT
TCCCTTCGACGTCATGACAGGATTCACAGCGGAGAGAAACCCTTTGTATGTAAGTATTGTGGGAAAGCTT
TCACTGGTCAAAGTTCACTTCCACGCCATGAAAGAATTCACAGTGGAGAGAAACCCTATGTATGCAAATA
CTGTGGCAAATGTTTCATTTCTTCAAGTACCTGTCGAGTACACGAACGGACTCACACTGGAGAGAAACTC
TATGTTTGTAACCTGTGTAATAAAGCTGTCACTACTCGTACTTCCCTTCGAAATCATGAAAGAATTCACA
GCGGTGAGAAACCCTATGTCTGTGAACAGTGTGGGAAAGGTTTCATCTCTTCTGGTACCTTTCGGATCCA
TGAACGAATTCACACCGGAGAGAAGCCCTATAGATGTAAGGAATGTGGTAAAGCCTTCACTATACAGAGT
TCTCTTCAGCGCCATGAAAGGATTCATACTAGGGAAAAACCCTATGACTGTAAGGAGTGTGGGAAAGCTT
TCAGTGGGTACAGTTCCCTTCGGCGCCATGAAAGGATTCACAGTGGAGAAAGGCCCTATGCATGCAAGCA
GTGTGGGAAAGCCTTTCCTGCTTTGGGTGACTGTCAGAGACATGAGCAAATTCACACCGGTGAGAAGCCC
TACATATGTAAGCAGTGTGGGAAAGCCTTCACTCGTTGTGGTTCCCTTAGAATACATGAAAAGACCCATG
CTAGAGAGAATTCCTAA

Translation (448 aa):
MDCLTFEDVAVNFTLEEWDLLDPSQKQLYTDVMQETFKNLIAIGQIEEVQRSKDVDEDSRRNLRRGLVEL
LYKPSEGRQCDGIFSEFPDTVMNKKTSHGVKRCESNLCEDILIGLPPLNMHIPLQPGHKRYEYEVYEDSL
YKFRECGKTFMYPECYLKHGNTHTIEKPYKCHQCGKAFSSSSKVRRHERTHTGEKPYICNHCGKAFPSRG
SLRRHDRIHSGEKPFVCKYCGKAFTGQSSLPRHERIHSGEKPYVCKYCGKCFISSSTCRVHERTHTGEKL
YVCNLCNKAVTTRTSLRNHERIHSGEKPYVCEQCGKGFISSGTFRIHERIHTGEKPYRCKECGKAFTIQS
SLQRHERIHTREKPYDCKECGKAFSGYSSLRRHERIHSGERPYACKQCGKAFPALGDCQRHEQIHTGEKP
YICKQCGKAFTRCGSLRIHEKTHARENS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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