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Report for CCDS22923.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22923.1 Public Mus musculus 9 Acp5 23 108 98 CCDS HistoryNCBI Gene:11433Re-query CCDS DB by CCDS ID:22923.1See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22923.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000069330.13 ENSMUSP00000065425.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000069330.13Link to Ensembl Protein Viewer:ENSMUSP00000065425.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000069330Re-query CCDS DB by Protein ID:ENSMUSP00000065425
Original member Current member EBI ENSMUST00000115315.2 ENSMUSP00000110970.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000115315.2Link to Ensembl Protein Viewer:ENSMUSP00000110970.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000115315Re-query CCDS DB by Protein ID:ENSMUSP00000110970
Original member Current member EBI ENSMUST00000165735.8 ENSMUSP00000127128.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000165735.8Link to Ensembl Protein Viewer:ENSMUSP00000127128.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000165735Re-query CCDS DB by Protein ID:ENSMUSP00000127128
Original member Current member EBI ENSMUST00000213815.1 ENSMUSP00000149597.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000213815.1Link to Ensembl Protein Viewer:ENSMUSP00000149597.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000213815Re-query CCDS DB by Protein ID:ENSMUSP00000149597
Original member Current member EBI ENSMUST00000217643.1 ENSMUSP00000150903.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000217643.1Link to Ensembl Protein Viewer:ENSMUSP00000150903.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000217643Re-query CCDS DB by Protein ID:ENSMUSP00000150903
Original member Current member NCBI NM_001102404.1 NP_001095874.1 Accepted alive Link to Nucleotide Sequence:NM_001102404.1Link to Protein Sequence:NP_001095874.1Re-query CCDS DB by Nucleotide ID:NM_001102404Re-query CCDS DB by Protein ID:NP_001095874Link to BLAST:NP_001095874.1
Original member Current member NCBI NM_001102405.1 NP_001095875.1 Accepted alive Link to Nucleotide Sequence:NM_001102405.1Link to Protein Sequence:NP_001095875.1Re-query CCDS DB by Nucleotide ID:NM_001102405Re-query CCDS DB by Protein ID:NP_001095875Link to BLAST:NP_001095875.1
Original member Current member NCBI NM_007388.3 NP_031414.1 Accepted alive Link to Nucleotide Sequence:NM_007388.3Link to Protein Sequence:NP_031414.1Re-query CCDS DB by Nucleotide ID:NM_007388Re-query CCDS DB by Protein ID:NP_031414Link to BLAST:NP_031414.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001095874.1 327 Q05117 327 100% 0 0
NP_001095875.1 327 Q05117 327 100% 0 0
NP_031414.1 327 Q05117 327 100% 0 0

Chromosomal Locations for CCDS 22923.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 22127020 22127262 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 22127675 22128020 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 22129531 22129658 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 22129863 22130129 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (984 nt):
ATGGATTCATGGGTGGTGCTGCTGGGCCTACAAATCATATGGCTCCCACTCCTGACCCACGGTACAGCCC
CCACTCCCACCCTGAGATTTGTGGCTGTGGGCGACTGGGGAGGGGTCCCCAATGCCCCATTCCACACAGC
CCGGGAAATGGCCAATGCCAAAGAGATCGCCAGAACCGTGCAGACGATGGGCGCTGACTTCATCATGTCT
CTGGGGGACAATTTCTACTTCACTGGAGTGCACGATGCCAGCGACAAGAGGTTCCAGGAGACCTTTGAGG
ACGTGTTCTCTGACCGTGCCCTTCGCAACATCCCCTGGTATGTGCTGGCTGGAAACCATGATCACCTTGG
CAACGTCTCTGCACAGATTGCATACTCTAAGATCTCCAAGCGCTGGAACTTCCCCAGCCCTTACTACCGT
TTGCGCTTCAAAATTCCACGTACAAACATAACTGTGGCCATCTTTATGCTGGACACAGTGATGCTGTGTG
GCAACTCAGATGACTTTGCCAGTCAGCAGCCCAAAATGCCTCGAGACCTGGGAGTGGCCCGCACTCAGCT
GTCCTGGCTCAAAAAGCAGTTGGCAGCAGCCAAGGAGGACTACGTTTTGGTGGCCGGCCACTACCCCATC
TGGTCCATCGCCGAGCACGGACCCACGCGCTGCCTTGTCAAGAACTTGCGACCATTGTTAGCCACATACG
GGGTCACTGCCTACCTGTGTGGACATGACCACAACCTGCAGTATCTTCAGGACGAGAACGGTGTGGGCTA
TGTGCTGAGTGGGGCCGGCAACTTCATGGATCCCTCTGTGCGACATCAACGAAAGGTCCCCAACGGCTAC
TTGCGGTTTCACTATGGATCTGAGGACTCCCTGGGCGGCTTCACACATGTGGAGATAAGCCCCAAAGAAA
TGACCATCATATATGTGGAAGCCTCTGGAAAATCACTCTTTAAGACCAGCCTCCCAAGGAGACCCAGACC
CTGA

Translation (327 aa):
MDSWVVLLGLQIIWLPLLTHGTAPTPTLRFVAVGDWGGVPNAPFHTAREMANAKEIARTVQTMGADFIMS
LGDNFYFTGVHDASDKRFQETFEDVFSDRALRNIPWYVLAGNHDHLGNVSAQIAYSKISKRWNFPSPYYR
LRFKIPRTNITVAIFMLDTVMLCGNSDDFASQQPKMPRDLGVARTQLSWLKKQLAAAKEDYVLVAGHYPI
WSIAEHGPTRCLVKNLRPLLATYGVTAYLCGHDHNLQYLQDENGVGYVLSGAGNFMDPSVRHQRKVPNGY
LRFHYGSEDSLGGFTHVEISPKEMTIIYVEASGKSLFKTSLPRRPRP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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