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Report for CCDS22196.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22196.1 Public Mus musculus 8 Adam3 23 108 98 CCDS HistoryNCBI Gene:11497Re-query CCDS DB by CCDS ID:22196.1See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22196.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000033958.14 ENSMUSP00000033958.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000033958.14Link to Ensembl Protein Viewer:ENSMUSP00000033958.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000033958Re-query CCDS DB by Protein ID:ENSMUSP00000033958
Original member Current member EBI ENSMUST00000171438.7 ENSMUSP00000132651.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000171438.7Link to Ensembl Protein Viewer:ENSMUSP00000132651.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000171438Re-query CCDS DB by Protein ID:ENSMUSP00000132651
Original member Current member NCBI NM_009619.5 NP_033749.2 Accepted alive Link to Nucleotide Sequence:NM_009619.5Link to Protein Sequence:NP_033749.2Re-query CCDS DB by Nucleotide ID:NM_009619Re-query CCDS DB by Protein ID:NP_033749Link to BLAST:NP_033749.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_033749.2 822 F8VQ03 822 100% 0 0

Chromosomal Locations for CCDS 22196.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 24680718 24680754 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 24681382 24681606 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 24684541 24684733 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 24687882 24687996 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 24689401 24689487 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 24694171 24694354 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 24694620 24694707 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 24695141 24695336 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 24697130 24697228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 24703750 24703939 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 24707359 24707495 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 24710218 24710299 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 24711300 24711466 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 24711677 24711748 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 24714194 24714259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 24714937 24715114 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 24715526 24715602 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 24719415 24719493 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 24723486 24723541 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 24725279 24725361 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 24725699 24725756 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2469 nt):
ATGCTGCCCTTATTCCTAGTCCTCTCATACCTAGGCCAAGTGATCGCTGCAGGCAAAGACGTAGAAACAC
CACTTCTGCAGATCACAGTACCAGAGAAAATCGACACCAACATCCAGGATGCCAAGGAGGCAGAGACACA
AGTCACTTACGTGGTCAGAATTGAGGGCAAAGCATACACACTCCAACTTGAAAAACAGTCATTTTTACAC
CCACTTTTTGGAACATATTTGCGTGACAAGTTGGGAACATTGCAACCATACTTTTCTTTAGTAAAGACTC
ACTGCTTTTATCAAGGACATGCTGCCGAGATCCCAGTATCAACAGTGACACTCAGCACTTGCTCAGGTCT
CAGGGGTTTGTTGCAGTTAGAGAACATCACTTATGGAATTGAGCCCTTGGAGTCTTCAGCTACATTTGAA
CACATACTTTATGAAATTAAGAATAACAAAATTGACTATTCTCCTTTAAAAGAAAACTTCGCAAATTCTG
AGCAAGAAAGTCAGTCCTACCGAATCCTTGTCAAACCAGAGAAAGGTTCGAACTCGACACTAACAAAGAG
AATTCTGAGGATAAAGATCATCATGGATAAAGCCATGTTTGACCATATGGGCTCTGAGGTGGGAGTTGCA
ACTCAGAAAGTTGTTCACATCTTTGGTCTCATTAATACTATGTTTTCCCAGCTGAAGATGACAGTGATGT
TAAACTCTCTGGAGATCTGGTCAGAACAAGACAAGATAGAAACCAATGGGGATGCTGATGAGGTCCTGCA
AAGGTTCCTGCTGTGGAAAAGCAAGGAAATATCTCAAAAGGCCCAGGATATAACCTACTTACTCCTGTAT
AAGGATCATCCTGATTATGTGGGAGCGACATATCATGGGATGGCCTGCAACCCAAATTTTACCGCAGGAA
TTGCTCTGCATCCAAAGACGTTAGCTGTGGAGGGCTTTGCCATTGTTCTCTCACAGTTGCTGGGAATTAA
CCTGGGGTTGGCATACGATGACGTCTACAATTGTTTCTGTCCAGGAAGCACATGCATAATGAATCCTTCG
GCAATACGTTCCCAAGGCATAAAGGTTTTTAGCAGTTGTAGTGTGGATGAATTCAAACAGCTGGCTTCAC
AACCTGAACTGGACTGCCTTCGGAATACATCGGAGACAGAATTTGTTGTCCAGCCCCAAGGTGGATCGTA
TTGTGGTAACCATCTCCTGGAGGTCCCAGAGCAATGTGACTGTGGCCCACCAGAGACCTGTACTCATAAA
AAATGCTGTAACCCTAAAGACTGTACTCTGATTGATGCTGCGCAGTGTGGTACAGGGCCATGCTGTGATA
AAAGAACATGTACGATAGCCGAAAGAGGACGCCTATGCAGAAAAAGTAAGGACCAGTGTGATTTCCCAGA
GTTCTGCAATGGAGAAACTGAAGGCTGTGCCCCTGATACAAAAGCTGCAGACCTGGAACCTTGCAACAAC
GAGACTGCCTATTGCTTTGGTGGGGTTTGCCGAGACCCAGATAGGCAGTGTACAGATTTATTTGGGAAAT
ATGCTAAGGGTCCTAATTATGTGTGTGCACAAGAAGTGAATCTGCAAAATGACAAATTTGGAAACTGTCA
TGGGCGATGTAATTATAGTGCTATATTTTGTGGAAAAGCAGTTTGCTACTGGAACTTTGCAGAAGTCATA
CAAACAGAGAAATATGATGTTCAGTATACTTACTTGGGAGGCCAGGTGTGTGTGTCCGCTCATTTAAGAT
CACAGACTGGGACTAGAGATGACACATATGTCCATGATGGCACTGTTTGTGGTAGTGGCCAGGTTTGCTT
CCGAGGAGATTGCTTACGTGTGCATGTCCTAAGGGGAACCAGGGAGTGTGAGGCCGATGACAAATGCCAA
GGACACGGGATTTGCAACAATCTAAACAACTGTCAGTGTGAATCTGGTTTTGCTCCTCCAGAGTGTGACA
TGACACCTTCATCTCCAGGAGGAAGCATGGATGACGGATTTTGGCTGCCCTTCGATAAAAGCACACCTTT
GATTTTCAAGCGGCATGGCCTTAAGTACAAAAAAGTGCTTTTGATCAGTTTCTATATCCTCCTGCCTTTC
CTTGTTGTGCTAGCCTTCATGGCTGTTAAGCGGATGATTGGTAAGCGGCTTGCTAAGCAGAATATCTCAA
AGGCATTGGAGCACAAAGAGGAAGCATTCAACAGAGGGTCCATGAACCCAGGCGTGGTCTCCGGTGGCAA
CACAGACCAGAACCTCATGACAGTCCCAGGTAGCTTCAACAGCTACGCATATCATGGCAACACAGACCAG
AACTTCATGACGGTCCCAGGTAGCTTCAACAGCTACTCATATCATGGCAACACAGACCAGAACTTCATGA
CGGTCCCAGGTAGCTTCAACAGCTACTCATATCAGGATGTTCCTTACTACCGATCAATACCAGAAGACGG
TAACGACAGCCAGCAGTAA

Translation (822 aa):
MLPLFLVLSYLGQVIAAGKDVETPLLQITVPEKIDTNIQDAKEAETQVTYVVRIEGKAYTLQLEKQSFLH
PLFGTYLRDKLGTLQPYFSLVKTHCFYQGHAAEIPVSTVTLSTCSGLRGLLQLENITYGIEPLESSATFE
HILYEIKNNKIDYSPLKENFANSEQESQSYRILVKPEKGSNSTLTKRILRIKIIMDKAMFDHMGSEVGVA
TQKVVHIFGLINTMFSQLKMTVMLNSLEIWSEQDKIETNGDADEVLQRFLLWKSKEISQKAQDITYLLLY
KDHPDYVGATYHGMACNPNFTAGIALHPKTLAVEGFAIVLSQLLGINLGLAYDDVYNCFCPGSTCIMNPS
AIRSQGIKVFSSCSVDEFKQLASQPELDCLRNTSETEFVVQPQGGSYCGNHLLEVPEQCDCGPPETCTHK
KCCNPKDCTLIDAAQCGTGPCCDKRTCTIAERGRLCRKSKDQCDFPEFCNGETEGCAPDTKAADLEPCNN
ETAYCFGGVCRDPDRQCTDLFGKYAKGPNYVCAQEVNLQNDKFGNCHGRCNYSAIFCGKAVCYWNFAEVI
QTEKYDVQYTYLGGQVCVSAHLRSQTGTRDDTYVHDGTVCGSGQVCFRGDCLRVHVLRGTRECEADDKCQ
GHGICNNLNNCQCESGFAPPECDMTPSSPGGSMDDGFWLPFDKSTPLIFKRHGLKYKKVLLISFYILLPF
LVVLAFMAVKRMIGKRLAKQNISKALEHKEEAFNRGSMNPGVVSGGNTDQNLMTVPGSFNSYAYHGNTDQ
NFMTVPGSFNSYSYHGNTDQNFMTVPGSFNSYSYQDVPYYRSIPEDGNDSQQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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