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Report for CCDS34184.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34184.1 Public Homo sapiens 5 MCCC2 24 110 108 CCDS HistoryNCBI Gene:64087Re-query CCDS DB by CCDS ID:34184.1Re-query CCDS DB by GeneID:64087See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34184.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000340941.11 ENSP00000343657.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000340941.11Link to Ensembl Protein Viewer:ENSP00000343657.6Re-query CCDS DB by Nucleotide ID:ENST00000340941Re-query CCDS DB by Protein ID:ENSP00000343657
Original member Current member NCBI NM_022132.5 NP_071415.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_022132.5Link to Protein Sequence:NP_071415.1Re-query CCDS DB by Nucleotide ID:NM_022132Re-query CCDS DB by Protein ID:NP_071415Link to BLAST:NP_071415.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_071415.1 563 Q9HCC0-1 563 100% 0 0

Chromosomal Locations for CCDS 34184.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 71587426 71587554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 71592926 71592992 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 71596280 71596364 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 71599659 71599760 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 71602506 71602633 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 71604356 71604468 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 71626640 71626753 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 71632121 71632185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 71634943 71635042 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 71635151 71635246 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 71641003 71641075 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 71643819 71643895 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 71646211 71646277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 71649097 71649253 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 71650069 71650183 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 71652669 71652754 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 71656743 71656860 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1692 nt):
ATGTGGGCCGTCCTGAGGTTAGCCCTGCGGCCGTGTGCCCGCGCCTCTCCCGCCGGGCCGCGCGCCTATC
ACGGGGACTCGGTGGCCTCGCTGGGCACCCAGCCGGACTTGGGCTCTGCCCTCTACCAGGAGAACTACAA
GCAGATGAAAGCACTAGTAAATCAGCTCCATGAACGAGTGGAGCATATAAAACTAGGAGGTGGTGAGAAA
GCCCGAGCACTTCACATATCAAGAGGAAAACTATTGCCCAGAGAAAGAATTGACAATCTCATAGACCCAG
GGTCTCCATTTCTGGAATTATCCCAGTTTGCAGGTTACCAGTTATATGACAATGAGGAGGTGCCAGGAGG
TGGCATTATTACAGGCATTGGAAGAGTATCAGGAGTAGAATGCATGATTATTGCCAATGATGCCACCGTC
AAAGGAGGTGCCTACTACCCAGTGACTGTGAAAAAACAATTACGGGCCCAAGAAATTGCCATGCAAAACA
GGCTCCCCTGCATCTACTTAGTTGATTCGGGAGGAGCATACTTACCTCGACAAGCAGATGTGTTTCCAGA
TCGAGACCACTTTGGCCGTACATTCTATAATCAGGCAATTATGTCTTCTAAAAATATTGCACAGATCGCA
GTGGTCATGGGCTCCTGCACCGCAGGAGGAGCCTATGTGCCTGCCATGGCTGATGAAAACATCATTGTAC
GCAAGCAGGGTACCATTTTCTTGGCAGGACCCCCCTTGGTTAAAGCGGCAACTGGGGAAGAAGTATCTGC
TGAGGATCTTGGAGGTGCTGATCTTCATTGCAGAAAGTCTGGAGTAAGTGACCACTGGGCTTTGGATGAT
CATCATGCCCTTCACTTAACTAGGAAGGTTGTGAGGAATCTAAATTATCAGAAGAAATTGGATGTCACCA
TTGAACCTTCTGAAGAGCCTTTATTTCCTGCTGATGAATTGTATGGAATAGTTGGTGCTAACCTTAAGAG
GAGCTTTGATGTCCGAGAGGTCATTGCTAGAATCGTGGATGGAAGCAGATTCACTGAGTTCAAAGCCTTT
TATGGAGACACATTAGTTACAGGATTTGCTCGAATATTTGGGTACCCAGTAGGTATCGTTGGAAACAACG
GAGTTCTCTTTTCTGAATCTGCAAAAAAGGGTACTCACTTTGTCCAGTTATGCTGCCAAAGAAATATTCC
TCTGCTGTTCCTTCAAAACATTACTGGATTTATGGTTGGTAGAGAGTATGAAGCTGAAGGAATTGCCAAG
GATGGTGCCAAGATGGTGGCCGCTGTGGCCTGTGCCCAAGTGCCTAAGATAACCCTCATCATTGGGGGCT
CCTATGGAGCCGGAAACTATGGGATGTGTGGCAGAGCATATAGCCCAAGATTTCTCTACATTTGGCCAAA
TGCTCGTATCTCAGTGATGGGAGGAGAGCAGGCAGCCAATGTGTTGGCCACGATAACAAAGGACCAAAGA
GCCCGGGAAGGAAAGCAGTTCTCCAGTGCTGATGAAGCGGCTTTAAAAGAGCCCATCATTAAGAAGTTTG
AAGAGGAAGGAAACCCTTACTATTCCAGCGCAAGGGTATGGGATGATGGGATCATTGATCCAGCAGACAC
CAGACTGGTCTTGGGTCTCAGTTTTAGTGCAGCCCTCAACGCACCAATAGAGAAGACTGACTTCGGTATC
TTCAGGATGTAA

Translation (563 aa):
MWAVLRLALRPCARASPAGPRAYHGDSVASLGTQPDLGSALYQENYKQMKALVNQLHERVEHIKLGGGEK
ARALHISRGKLLPRERIDNLIDPGSPFLELSQFAGYQLYDNEEVPGGGIITGIGRVSGVECMIIANDATV
KGGAYYPVTVKKQLRAQEIAMQNRLPCIYLVDSGGAYLPRQADVFPDRDHFGRTFYNQAIMSSKNIAQIA
VVMGSCTAGGAYVPAMADENIIVRKQGTIFLAGPPLVKAATGEEVSAEDLGGADLHCRKSGVSDHWALDD
HHALHLTRKVVRNLNYQKKLDVTIEPSEEPLFPADELYGIVGANLKRSFDVREVIARIVDGSRFTEFKAF
YGDTLVTGFARIFGYPVGIVGNNGVLFSESAKKGTHFVQLCCQRNIPLLFLQNITGFMVGREYEAEGIAK
DGAKMVAAVACAQVPKITLIIGGSYGAGNYGMCGRAYSPRFLYIWPNARISVMGGEQAANVLATITKDQR
AREGKQFSSADEAALKEPIIKKFEEEGNPYYSSARVWDDGIIDPADTRLVLGLSFSAALNAPIEKTDFGI
FRM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
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