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Report for CCDS24003.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24003.1 Public Mus musculus 10 Cnn2 23 108 98 CCDS HistoryNCBI Gene:12798Re-query CCDS DB by CCDS ID:24003.1Re-query CCDS DB by GeneID:12798See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 24003.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000004784.10 ENSMUSP00000004784.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000004784.10Link to Ensembl Protein Viewer:ENSMUSP00000004784.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000004784Re-query CCDS DB by Protein ID:ENSMUSP00000004784
Original member Current member NCBI NM_007725.2 NP_031751.1 Accepted alive Link to Nucleotide Sequence:NM_007725.2Link to Protein Sequence:NP_031751.1Re-query CCDS DB by Nucleotide ID:NM_007725Re-query CCDS DB by Protein ID:NP_031751Link to BLAST:NP_031751.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_031751.1 305 Q08093 305 100% 0 0

Chromosomal Locations for CCDS 24003.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 79988678 79988740 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 79991360 79991481 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 79992273 79992339 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 79992443 79992580 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 79993214 79993330 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 79993428 79993574 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 79994351 79994614 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (918 nt):
ATGAGCTCCACGCAGTTCAACAAGGGCCCGTCCTACGGGCTCTCGGCCGAGGTCAAGAACCGGCTCCTGT
CCAAATATGACCCCCAAAAGGAAGCAGAACTCCGAAGCTGGATAGAGGGACTCACGGGCCTCTCCATTGG
CCCTGACTTCCAGAAGGGTCTGAAAGATGGGGTTATCCTATGCACACTCATGAACAAGCTGCAGCCAGGC
TCCGTCCCTAAAATCAACCGCTCTATGCAGAACTGGCACCAGCTAGAAAATCTCTCCAACTTCATCAAGG
CCATGGTCAGCTACGGCATGAACCCTGTGGACCTGTTTGAGGCCAATGACCTGTTCGAGAGCGGGAACAT
GACACAGGTGCAAGTGTCTCTGCTTGCACTGGCTGGAAAGGCCAAGACCAAGGGGCTGCAGAGTGGTGTG
GACATTGGAGTTAAGTATTCGGAGAAACAGGAGAGGAACTTTGACGACGCCACCATGAAGGCCGGCCAGT
GCGTCATCGGGCTGCAGATGGGCACCAACAAGTGTGCCAGCCAGTCTGGCATGACAGCCTATGGTACCAG
GAGACATCTCTATGACCCCAAGAACCATATCCTGCCTCCCATGGACCACTGCACCATCAGCCTCCAGATG
GGCACCAACAAGTGTGCCAGCCAGGTGGGCATGACAGCTCCAGGGACCCGGAGGCACATCTATGACACCA
AGCTGGGCACCGACAAGTGCGACAACTCTTCCATGTCCCTGCAGATGGGCTACACGCAGGGCGCCAACCA
GAGCGGTCAGGTCTTCGGACTGGGGCGGCAGATCTACGATCCCAAGTATTGCCCACAGGGCTCTGCAGCT
GACGGGGCTCCTGCGGGTGACGGCCAAGGCGAGGCCCCAGAGTACCTGGCCTACTGCCAGGAGGAAGCTG
GCTACTGA

Translation (305 aa):
MSSTQFNKGPSYGLSAEVKNRLLSKYDPQKEAELRSWIEGLTGLSIGPDFQKGLKDGVILCTLMNKLQPG
SVPKINRSMQNWHQLENLSNFIKAMVSYGMNPVDLFEANDLFESGNMTQVQVSLLALAGKAKTKGLQSGV
DIGVKYSEKQERNFDDATMKAGQCVIGLQMGTNKCASQSGMTAYGTRRHLYDPKNHILPPMDHCTISLQM
GTNKCASQVGMTAPGTRRHIYDTKLGTDKCDNSSMSLQMGYTQGANQSGQVFGLGRQIYDPKYCPQGSAA
DGAPAGDGQGEAPEYLAYCQEEAGY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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