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Report for CCDS39856.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
39856.1 Public Mus musculus 7 Dll3 23 108 98 CCDS HistoryNCBI Gene:13389Re-query CCDS DB by CCDS ID:39856.1Re-query CCDS DB by GeneID:13389See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 39856.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000108315.3 ENSMUSP00000103951.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000108315.3Link to Ensembl Protein Viewer:ENSMUSP00000103951.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000108315Re-query CCDS DB by Protein ID:ENSMUSP00000103951
Original member Current member NCBI NM_007866.2 NP_031892.2 Accepted alive Link to Nucleotide Sequence:NM_007866.2Link to Protein Sequence:NP_031892.2Re-query CCDS DB by Nucleotide ID:NM_007866Re-query CCDS DB by Protein ID:NP_031892Link to BLAST:NP_031892.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_031892.2 585 O88516-2 585 100% 0 0

Chromosomal Locations for CCDS 39856.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 28293921 28293926 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28294041 28294125 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28294344 28294923 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28296288 28296510 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28298519 28298736 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28298893 28299135 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28300167 28300224 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28301284 28301565 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28301684 28301746 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1758 nt):
ATGGTCTCTCTGCAGGTGTCTCCGCTTTCCCAGACGCTGATCCTGGCTTTTCTTCTTCCTCAGGCACTGC
CAGCTGGTGTCTTCGAGCTACAAATTCATTCTTTCGGGCCAGGCCCAGGCCTCGGGACCCCACGCTCCCC
CTGCAACGCCCGAGGCCCTTGCCGCCTCTTCTTCAGGGTCTGCCTGAAGCCCGGAGTCTCCCAGGAGGCC
ACCGAGTCCCTGTGCGCCCTGGGCGCAGCACTGAGCACGAGCGTCCCGGTCTATACGGAGCACCCCGGAG
AGTCAGCGGCTGCCCTGCCGCTGCCTGATGGCCTCGTACGTGTGCCCTTCCGCGATGCTTGGCCGGGCAC
CTTCTCCCTCGTCATTGAAACCTGGAGAGAGCAGCTGGGAGAGCATGCTGGAGGGCCCGCCTGGAACCTG
CTAGCACGTGTGGTCGGCCGTAGACGCCTGGCGGCTGGGGGCCCGTGGGCCCGCGATGTGCAGCGCACAG
GCACATGGGAGTTGCACTTCTCCTACCGCGCGCGGTGCGAGCCGCCCGCCGTCGGGGCCGCCTGCGCGCG
CCTGTGCCGCTCACGCAGTGCCCCCTCGCGGTGTGGCCCGGGACTGCGACCCTGCACGCCATTCCCAGAC
GAGTGCGAAGCCCCGTCTGTGTGTCGACCAGGCTGCAGCCCCGAGCACGGCTACTGTGAAGAGCCTGATG
AATGCCGTTGCCTGGAGGGCTGGACTGGACCCCTCTGCACGGTCCCTGTCTCCACCAGTAGCTGCCTGAA
CTCCAGGGTTCCTGGTCCTGCCAGCACTGGATGCCTTTTACCTGGGCCTGGACCTTGTGATGGGAACCCA
TGTGCCAATGGGGGCAGCTGTAGTGAAACCTCTGGCTCCTTTGAATGTGCCTGTCCCCGGGGATTCTACG
GGCTTCGATGTGAGGTGAGCGGGGTCACGTGCGCAGATGGACCCTGCTTCAATGGCGGCTTGTGTGTTGG
CGGTGAAGATCCTGACTCTGCCTATGTCTGTCATTGCCCACCTGGTTTCCAAGGCTCTAACTGTGAGAAG
AGGGTGGACCGCTGTAGCCTGCAGCCATGTCAGAATGGCGGCCTCTGCCTGGACCTGGGCCACGCGTTGC
GCTGCCGCTGTCGCGCGGGATTCGCCGGGCCGCGCTGCGAGCACGACCTGGACGACTGCGCCGGCCGCGC
CTGTGCCAACGGCGGCACGTGCGTGGAGGGCGGCGGCTCGCGCCGCTGCTCCTGTGCGCTGGGCTTCGGC
GGGCGCGACTGCCGAGAACGCGCCGACCCCTGCGCCTCCCGCCCCTGCGCGCATGGAGGCCGTTGCTACG
CCCACTTCTCTGGCCTGGTCTGCGCCTGCGCGCCCGGCTACATGGGCGTGAGATGCGAGTTCGCTGTGCG
CCCGGACGGCGCGGACGCGGTGCCCGCCGCCCCGCGGGGCCTGAGGCAGGCGGATCCACAGCGCTTTCTT
CTGCCTCCCGCCTTGGGGCTGCTGGTGGCCGCCGGTTTGGCTGGCGCCGCACTCTTGGTCATCCACGTTC
GCCGCCGAGGTCCTGGCCAGGATACCGGGACTCGCCTGCTTTCTGGGACCCGGGAGCCTTCGGTCCACAC
GCTCCCGGATGCACTCAACAACCTGAGGTTACAAGACGGTGCTGGGGATGGCCCCAGTTCGTCGGCTGAC
TGGAATCATCCTGAAGATGGAGACTCTAGATCCATTTATGTCATACCAGCCCCTTCCATTTATGCACGAG
AGGCCTGA

Translation (585 aa):
MVSLQVSPLSQTLILAFLLPQALPAGVFELQIHSFGPGPGLGTPRSPCNARGPCRLFFRVCLKPGVSQEA
TESLCALGAALSTSVPVYTEHPGESAAALPLPDGLVRVPFRDAWPGTFSLVIETWREQLGEHAGGPAWNL
LARVVGRRRLAAGGPWARDVQRTGTWELHFSYRARCEPPAVGAACARLCRSRSAPSRCGPGLRPCTPFPD
ECEAPSVCRPGCSPEHGYCEEPDECRCLEGWTGPLCTVPVSTSSCLNSRVPGPASTGCLLPGPGPCDGNP
CANGGSCSETSGSFECACPRGFYGLRCEVSGVTCADGPCFNGGLCVGGEDPDSAYVCHCPPGFQGSNCEK
RVDRCSLQPCQNGGLCLDLGHALRCRCRAGFAGPRCEHDLDDCAGRACANGGTCVEGGGSRRCSCALGFG
GRDCRERADPCASRPCAHGGRCYAHFSGLVCACAPGYMGVRCEFAVRPDGADAVPAAPRGLRQADPQRFL
LPPALGLLVAAGLAGAALLVIHVRRRGPGQDTGTRLLSGTREPSVHTLPDALNNLRLQDGAGDGPSSSAD
WNHPEDGDSRSIYVIPAPSIYAREA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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