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Report for CCDS8188.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8188.1 Public Homo sapiens 11 MRGPRF 24 110 108 CCDS HistoryNCBI Gene:116535Re-query CCDS DB by CCDS ID:8188.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8188.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000309099.7 ENSP00000309782.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000309099.7Link to Ensembl Protein Viewer:ENSP00000309782.6Re-query CCDS DB by Nucleotide ID:ENST00000309099Re-query CCDS DB by Protein ID:ENSP00000309782
Original member Current member EBI ENST00000441623.1 ENSP00000403660.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000441623.1Link to Ensembl Protein Viewer:ENSP00000403660.1Re-query CCDS DB by Nucleotide ID:ENST00000441623Re-query CCDS DB by Protein ID:ENSP00000403660
Original member Current member NCBI NM_001098515.2 NP_001091985.1 Accepted alive Link to Nucleotide Sequence:NM_001098515.2Link to Protein Sequence:NP_001091985.1Re-query CCDS DB by Nucleotide ID:NM_001098515Re-query CCDS DB by Protein ID:NP_001091985Link to BLAST:NP_001091985.1
Original member Current member NCBI NM_145015.5 NP_659452.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_145015.5Link to Protein Sequence:NP_659452.3Re-query CCDS DB by Nucleotide ID:NM_145015Re-query CCDS DB by Protein ID:NP_659452Link to BLAST:NP_659452.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001091985.1 343 Q96AM1 343 100% 0 0
NP_659452.3 343 Q96AM1 343 100% 0 0

Chromosomal Locations for CCDS 8188.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 69005278 69006261 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 69009854 69009901 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1032 nt):
ATGGCTGGAAACTGCTCCTGGGAGGCCCATCCCGGCAACAGGAACAAGATGTGCCCTGGCCTGAGCGAGG
CCCCGGAACTCTACAGCCGGGGCTTCCTGACCATCGAGCAGATCGCGATGCTGCCGCCTCCGGCCGTCAT
GAACTACATCTTCCTGCTCCTCTGCCTGTGTGGCCTGGTGGGCAACGGGCTGGTCCTCTGGTTTTTCGGC
TTCTCCATCAAGAGGAACCCCTTCTCCATCTACTTCCTGCACCTGGCCAGCGCCGATGTGGGCTACCTCT
TCAGCAAGGCGGTGTTCTCCATCCTGAACACGGGGGGCTTCCTGGGCACGTTTGCCGACTACATCCGCAG
CGTGTGCCGGGTCCTGGGGCTCTGCATGTTCCTTACCGGCGTGAGCCTCCTGCCGGCCGTCAGCGCCGAG
CGCTGCGCCTCGGTCATCTTCCCCGCCTGGTACTGGCGCCGGCGGCCCAAGCGCCTGTCGGCCGTGGTGT
GCGCCCTGCTGTGGGTCCTGTCCCTCCTGGTCACCTGCCTGCACAACTACTTCTGCGTGTTCCTGGGCCG
CGGGGCCCCCGGCGCGGCCTGCAGGCACATGGACATCTTCCTGGGCATCCTCCTGTTCCTGCTCTGCTGC
CCGCTCATGGTGCTGCCCTGCCTGGCCCTCATCCTGCACGTGGAGTGCCGGGCCCGACGGCGCCAGCGCT
CTGCCAAGCTCAACCACGTCATCCTGGCCATGGTCTCCGTCTTCCTGGTGTCCTCCATCTACTTAGGGAT
CGACTGGTTCCTCTTCTGGGTCTTCCAGATCCCGGCCCCCTTCCCCGAGTACGTCACTGACCTGTGCATC
TGCATCAACAGCAGCGCCAAGCCCATCGTCTACTTCCTGGCCGGGAGGGACAAGTCGCAGCGGCTGTGGG
AGCCGCTCAGGGTGGTCTTCCAGCGGGCCCTGCGGGACGGCGCTGAGCTGGGGGAGGCCGGGGGCAGCAC
GCCCAACACAGTCACCATGGAGATGCAGTGTCCCCCGGGGAACGCCTCCTGA

Translation (343 aa):
MAGNCSWEAHPGNRNKMCPGLSEAPELYSRGFLTIEQIAMLPPPAVMNYIFLLLCLCGLVGNGLVLWFFG
FSIKRNPFSIYFLHLASADVGYLFSKAVFSILNTGGFLGTFADYIRSVCRVLGLCMFLTGVSLLPAVSAE
RCASVIFPAWYWRRRPKRLSAVVCALLWVLSLLVTCLHNYFCVFLGRGAPGAACRHMDIFLGILLFLLCC
PLMVLPCLALILHVECRARRRQRSAKLNHVILAMVSVFLVSSIYLGIDWFLFWVFQIPAPFPEYVTDLCI
CINSSAKPIVYFLAGRDKSQRLWEPLRVVFQRALRDGAELGEAGGSTPNTVTMEMQCPPGNAS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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