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Report for CCDS73369.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73369.1 Public Homo sapiens 11 CWC15 24 110 108 CCDS HistoryNCBI Gene:51503Re-query CCDS DB by CCDS ID:73369.1Re-query CCDS DB by GeneID:51503See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 73369.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000279839.8 ENSP00000475615.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000279839.8Link to Ensembl Protein Viewer:ENSP00000475615.2Re-query CCDS DB by Nucleotide ID:ENST00000279839Re-query CCDS DB by Protein ID:ENSP00000475615
Original member Current member NCBI NM_001363371.2 NP_001350300.1 Accepted alive Link to Nucleotide Sequence:NM_001363371.2Link to Protein Sequence:NP_001350300.1Re-query CCDS DB by Nucleotide ID:NM_001363371Re-query CCDS DB by Protein ID:NP_001350300Link to BLAST:NP_001350300.1
Original member Current member NCBI NM_001363372.2 NP_001350301.1 Accepted alive Link to Nucleotide Sequence:NM_001363372.2Link to Protein Sequence:NP_001350301.1Re-query CCDS DB by Nucleotide ID:NM_001363372Re-query CCDS DB by Protein ID:NP_001350301Link to BLAST:NP_001350301.1
Original member Current member NCBI NM_016403.4 NP_057487.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_016403.4Link to Protein Sequence:NP_057487.2Re-query CCDS DB by Nucleotide ID:NM_016403Re-query CCDS DB by Protein ID:NP_057487Link to BLAST:NP_057487.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001350300.1 229 Q9P013 229 100% 0 0
NP_001350301.1 229 Q9P013 229 100% 0 0
NP_057487.2 229 Q9P013 229 100% 0 0

Chromosomal Locations for CCDS 73369.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 94963385 94963514 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 94966295 94966413 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 94969989 94970096 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 94970977 94971065 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 94971375 94971487 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 94972055 94972185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (690 nt):
ATGACAACAGCAGCCAGGCCAACCTTTGAACCTGCCAGAGGTGGAAGGGGAAAAGGAGAAGGTGATTTGA
GCCAACTTTCAAAGCAGTATTCAAGCAGAGACCTACCCTCTCATACAAAGATAAAATACAGACAGACTAC
TCAGGATGCCCCTGAAGAGGTTCGTAACCGTGACTTCAGGAGAGAGTTGGAAGAAAGAGAGAGAGCTGCT
GCAAGAGAGAAAAATAGGGATCGTCCAACCCGAGAACATACAACCTCCTCTTCAGTGTCAAAAAAGCCAC
GGTTAGACCAGATTCCTGCCGCCAACCTTGATGCAGATGACCCTCTAACAGATGAGGAAGATGAAGATTT
TGAAGAAGAAAGTGATGATGATGATACTGCAGCTCTTCTTGCAGAACTGGAAAAAATTAAAAAAGAAAGA
GCTGAAGAGCAGGCCAGGAAGGAACAAGAACAAAAAGCTGAAGAAGAGAGGATTCGTATGGAAAACATTC
TGAGCGGAAACCCTCTCCTTAATCTCACTGGCCCATCCCAGCCTCAGGCCAACTTCAAAGTTAAAAGAAG
GTGGGATGATGACGTTGTCTTCAAGAACTGTGCAAAAGGTGTAGATGACCAGAAGAAAGACAAAAGATTT
GTAAATGACACACTGCGATCTGAATTTCACAAAAAGTTCATGGAGAAATATATTAAATAG

Translation (229 aa):
MTTAARPTFEPARGGRGKGEGDLSQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRNRDFRRELEERERAA
AREKNRDRPTREHTTSSSVSKKPRLDQIPAANLDADDPLTDEEDEDFEEESDDDDTAALLAELEKIKKER
AEEQARKEQEQKAEEERIRMENILSGNPLLNLTGPSQPQANFKVKRRWDDDVVFKNCAKGVDDQKKDKRF
VNDTLRSEFHKKFMEKYIK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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