NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS14065.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14065.1 Public Homo sapiens 22 FAM118A 24 110 108 CCDS HistoryNCBI Gene:55007Re-query CCDS DB by CCDS ID:14065.1Re-query CCDS DB by GeneID:55007See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14065.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000216214.7 ENSP00000216214.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000216214.7Link to Ensembl Protein Viewer:ENSP00000216214.3Re-query CCDS DB by Nucleotide ID:ENST00000216214Re-query CCDS DB by Protein ID:ENSP00000216214
Original member Current member EBI ENST00000441876.7 ENSP00000395892.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000441876.7Link to Ensembl Protein Viewer:ENSP00000395892.2Re-query CCDS DB by Nucleotide ID:ENST00000441876Re-query CCDS DB by Protein ID:ENSP00000395892
Original member Current member NCBI NM_001104595.2 NP_001098065.1 Accepted alive Link to Nucleotide Sequence:NM_001104595.2Link to Protein Sequence:NP_001098065.1Re-query CCDS DB by Nucleotide ID:NM_001104595Re-query CCDS DB by Protein ID:NP_001098065Link to BLAST:NP_001098065.1
Original member Current member NCBI NM_001349913.2 NP_001336842.1 Accepted alive Link to Nucleotide Sequence:NM_001349913.2Link to Protein Sequence:NP_001336842.1Re-query CCDS DB by Nucleotide ID:NM_001349913Re-query CCDS DB by Protein ID:NP_001336842Link to BLAST:NP_001336842.1
Original member Current member NCBI NM_017911.4 NP_060381.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_017911.4Link to Protein Sequence:NP_060381.2Re-query CCDS DB by Nucleotide ID:NM_017911Re-query CCDS DB by Protein ID:NP_060381Link to BLAST:NP_060381.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001098065.1 357 Q9NWS6-1 357 100% 0 0
NP_001336842.1 357 Q9NWS6-1 357 100% 0 0
NP_060381.2 357 Q9NWS6-1 357 100% 0 0

Chromosomal Locations for CCDS 14065.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 45322380 45322426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 45323175 45323427 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 45327842 45328063 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 45330603 45330731 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 45332425 45332710 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 45335350 45335382 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 45336328 45336411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 45340386 45340405 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1074 nt):
ATGGATTCAGTGGAAAAGACAACAAATAGAAGTGAACAAAAATCCAGAAAGTTTTTAAAAAGCCTCATCC
GGAAACAGCCCCAGGAACTGCTCCTGGTTATCGGGACTGGCGTCAGCGCAGCAGTGGCCCCCGGAATCCC
TGCCCTTTGCTCGTGGAGAAGCTGCATCGAGGCCGTCATCGAGGCTGCAGAGCAGCTGGAGGTGCTGCAC
CCCGGAGACGTCGCCGAGTTCCGGAGGAAAGTGACAAAGGACCGGGACCTGTTGGTTGTCGCCCATGATC
TGATCCGGAAGATGTCACCTCGCACAGGCGATGCCAAGCCCAGCTTCTTCCAGGACTGCCTGATGGAGGT
GTTTGACGACCTGGAGCAGCACATCCGGAGTCCTGTGGTGCTGCAGTCGATCCTCAGCCTGATGGACAGG
GGCGCCATGGTCCTGACCACCAACTATGACAACCTGCTGGAGGCCTTTGGCCGGCGGCAGAACAAGCCCA
TGGAGTCCCTGGACTTGAAGGACAAGACCAAGGTCCTTGAATGGGCAAGAGGGCACATGAAGTACGGCGT
CCTCCACATTCACGGCCTCTACACGGACCCCTGCGGGGTGGTGCTGGACCCATCGGGGTATAAAGACGTC
ACTCAAGACGCAGAAGTCATGGAAGTCCTCCAGAACTTATACCGCACCAAGTCCTTTCTGTTTGTGGGCT
GTGGGGAGACCCTTCGTGATCAGATATTCCAGGCCCTCTTTCTTTACTCCGTGCCGAATAAGGTGGATTT
GGAGCACTACATGCTTGTGCTGAAGGAGAATGAAGACCATTTCTTTAAGCATCAGGCAGATATGCTTCTG
CACGGAATCAAAGTTGTATCCTACGGGGACTGTTTTGACCACTTTCCAGGATATGTGCAAGACCTTGCCA
CTCAGATCTGCAAACAGCAAAGCCCAGATGCTGATCGCGTGGACAGCACCACATTATTGGGTAATGCATG
CCAGGACTGTGCAAAGAGGAAGTTAGAAGAGAATGGAATTGAAGTTTCAAAAAAACGCACACAATCAGAT
ACTGATGATGCTGGAGGGTCTTGA

Translation (357 aa):
MDSVEKTTNRSEQKSRKFLKSLIRKQPQELLLVIGTGVSAAVAPGIPALCSWRSCIEAVIEAAEQLEVLH
PGDVAEFRRKVTKDRDLLVVAHDLIRKMSPRTGDAKPSFFQDCLMEVFDDLEQHIRSPVVLQSILSLMDR
GAMVLTTNYDNLLEAFGRRQNKPMESLDLKDKTKVLEWARGHMKYGVLHIHGLYTDPCGVVLDPSGYKDV
TQDAEVMEVLQNLYRTKSFLFVGCGETLRDQIFQALFLYSVPNKVDLEHYMLVLKENEDHFFKHQADMLL
HGIKVVSYGDCFDHFPGYVQDLATQICKQQSPDADRVDSTTLLGNACQDCAKRKLEENGIEVSKKRTQSD
TDDAGGS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH