NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS27094.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27094.1 Public Mus musculus 14 4931414P19Rik 23 108 98 CCDS HistoryNCBI Gene:74359Re-query CCDS DB by CCDS ID:27094.1Re-query CCDS DB by GeneID:74359See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 27094.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000022786.5 ENSMUSP00000022786.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000022786.5Link to Ensembl Protein Viewer:ENSMUSP00000022786.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000022786Re-query CCDS DB by Protein ID:ENSMUSP00000022786
Original member Current member NCBI NM_028890.2 NP_083166.1 Accepted alive Link to Nucleotide Sequence:NM_028890.2Link to Protein Sequence:NP_083166.1Re-query CCDS DB by Nucleotide ID:NM_028890Re-query CCDS DB by Protein ID:NP_083166Link to BLAST:NP_083166.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_083166.1 541 Q8K2W9 541 100% 0 0

Chromosomal Locations for CCDS 27094.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 54584281 54584706 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 54584979 54585091 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 54585652 54585755 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 54585936 54585997 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 54591122 54591439 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 54595114 54595716 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1626 nt):
ATGTCCTTTAGTGCCACCATTCTTTTCTCCCCTCCCAGTGGCAGTGAAGCCAGATGCTGCTGCTGTGCCT
GTAAGAGCGAGACTAGCCAGGGCAGCACGGGTTCTCAGGGCGGGAATCCTCCCGCCAGTACCCCCATCAC
AGTGACTGGACATGGCCTGGCGGTCCAAAGCTCTGAACAGCTCCTGCACATTATCTACCAGCGGGTGGAC
AAGGCAGTGGGTCTGGCTGAGGCCGCCCTGGGGCTTGCGCGGGCCAACAATGAGTTGTTAAAACAGCTCC
AGGAAGAAGTGGGTGAGCTACGGCAGGGGAAAGTGTGCACCGCTGATGAAGATAGGGAGAGCCGGGCCCG
CACCCCACCACCCGAAGAGCCTGGAGTGCTCAAGGGAAGTCCAGGAGAAGCCAGCAACTCTCTGCCTGCC
ATGGAGGAGGAGTGTGATAGCGTGGGCAGTGGCGTGCAGGTGGTGATCGAGGAGCTGCGGCAACTGGGGG
CTGCCTCCACCGTTGGGCAGGGGCCCTTGGGCTTCTTCGCAGCCCCCCAGAGAGATGCGCGCCTTCCAGG
GTGCACTCTGGCTGCGGTAGAGGGAGCTCCGCTGCTCAACCCGATGGCAGACGACTATGTGGCCTCTGAG
GGTTCAATACAACGAGTGCTGGTCCCCGCTTATGCCAAACAGCTTTCGCCAGCCACACAATTGGCTATCC
AGAGGGCATCCTCAGAGACAGGCCCAGAAAGTGGAACCAAGCTGCCCGCAACGCGCCCTGAGGGTGTGCT
CGGCTCTGCAGCTCTGGACAGTGCCTTGGACGAGTCAGGCGCTGGAGGCGCTGGGGAATTGAGCCGCTCT
CTTGGATTTGTTGGCTCCCCATGCAGGATCCGAGGGACTGGCCAGAAAAACTCCAGGCGGAAGCGAGATC
TGGTGCTCTCCAAACTGGTCCACAATGTGCATAACCACATCACCAATGACAAGAGATTCAATGGGTCAGA
AAGCATTAAGTCGTCTTGGAATATTTCAGTAGTGAAGTTCCTTCTGGAAAAGCTCAAGCAGGAGCTGATG
GTGAGCCCCCACAATTACACAGACAAGGAGCTGAAGGGAGCCTGTGTGGCCTACTTCCTTACCAAGAGGC
GAGAGTACCGCAATTCTCTCAACCCTTTCAAAGGCCTAAAGGAGAAAGAGGAGAAGAAACTTCGAAGTCG
CCGATACCGGCTTTTCGCCAATCGATCCAGTATCATGAGGCACTTCGGACCCGAGGACCAGCACCTGTGG
AAGGACGTGACAGAAGAGCTGATGTCCGACGAGGAGGACAGTCTTAATGAGCCAGGTGTGTGGGTGGCCC
GCTCGCCCCGATTCAGGGCCCAGCGCCTCACAGAGCTCTGCTACCACCTGGATGCTAACTCTAAGCACGG
CACCAAAGCCAACCGCGTCTACGGGCCTCCCTCAGACAGACTGCCTTCTGTGGAGGCCCAACTCCTTCCT
CCCGAGCTGTACAACCCCAATTTCCAAGAAGACGAAGGAGGGGGCAATGAGAAAGGACCTGTCTCCCCAT
CTTATGACCAGCCCCACAAGACATCCTGTCCTGACTTGAACTCGTTTATTGAAATCAAGGTGGAAAAGGA
TGAATACACTCTATAA

Translation (541 aa):
MSFSATILFSPPSGSEARCCCCACKSETSQGSTGSQGGNPPASTPITVTGHGLAVQSSEQLLHIIYQRVD
KAVGLAEAALGLARANNELLKQLQEEVGELRQGKVCTADEDRESRARTPPPEEPGVLKGSPGEASNSLPA
MEEECDSVGSGVQVVIEELRQLGAASTVGQGPLGFFAAPQRDARLPGCTLAAVEGAPLLNPMADDYVASE
GSIQRVLVPAYAKQLSPATQLAIQRASSETGPESGTKLPATRPEGVLGSAALDSALDESGAGGAGELSRS
LGFVGSPCRIRGTGQKNSRRKRDLVLSKLVHNVHNHITNDKRFNGSESIKSSWNISVVKFLLEKLKQELM
VSPHNYTDKELKGACVAYFLTKRREYRNSLNPFKGLKEKEEKKLRSRRYRLFANRSSIMRHFGPEDQHLW
KDVTEELMSDEEDSLNEPGVWVARSPRFRAQRLTELCYHLDANSKHGTKANRVYGPPSDRLPSVEAQLLP
PELYNPNFQEDEGGGNEKGPVSPSYDQPHKTSCPDLNSFIEIKVEKDEYTL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH