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Report for CCDS8832.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8832.1 Public Homo sapiens 12 KRT74 24 110 108 CCDS HistoryNCBI Gene:121391Re-query CCDS DB by CCDS ID:8832.1See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8832.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000305620.3 ENSP00000307240.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000305620.3Link to Ensembl Protein Viewer:ENSP00000307240.2Re-query CCDS DB by Nucleotide ID:ENST00000305620Re-query CCDS DB by Protein ID:ENSP00000307240
Original member Current member NCBI NM_175053.4 NP_778223.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_175053.4Link to Protein Sequence:NP_778223.2Re-query CCDS DB by Nucleotide ID:NM_175053Re-query CCDS DB by Protein ID:NP_778223Link to BLAST:NP_778223.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_778223.2 529 Q7RTS7 529 100% 0 0

Chromosomal Locations for CCDS 8832.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 52566969 52567168 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 52567659 52567693 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 52568169 52568389 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 52569859 52569984 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 52570669 52570833 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 52571359 52571454 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 52571944 52572004 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 52572453 52572667 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 52573307 52573777 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1590 nt):
ATGAGTCGGCAACTGAACATCAAGTCCAGTGGTGACAAGGGCAACTTCAGTGTGCATTCGGCAGTGGTGC
CAAGGAAGGCTGTGGGTAGCCTGGCTTCTTACTGTGCAGCTGGCAGAGGGGCTGGCGCTGGCTTTGGCAG
TCGGAGCCTCTATAGCCTTGGAGGGAATCGGCGTATTTCTTTCAATGTGGCTGGTGGCGGCGTTCGGGCT
GGAGGTTACGGCTTCAGGCCTGGCTCTGGGTATGGAGGGGGCCGGGCCAGTGGCTTTGCTGGCAGTATGT
TTGGCAGTGTGGCCCTGGGGCCTGCATGTTTGTCTGTGTGCCCACCTGGGGGCATCCACCAGGTCACTGT
CAACAAGAGCCTCTTGGCCCCCCTCAACGTGGAGCTGGACCCTGAGATCCAGAAGGTGCGCGCCCAGGAG
CGGGAACAGATCAAGGTGCTGAACGACAAGTTCGCCTCCTTCATTGACAAGGTACGCTTCCTAGAGCAGC
AGAACCAGGTTCTAGAAACCAAGTGGGAGCTGCTGCAGCAGCTGGACCTGAACAACTGCAAGAAGAACCT
GGAGCCCATCCTTGAGGGCTACATCAGCAACCTGCGGAAGCAGCTGGAGACACTGTCTGGGGACAGGGTG
AGGCTGGACTCGGAGCTGAGAAGCATGAGGGATCTGGTGGAGGACTATAAGAAGAGATATGAAGTGGAGA
TTAACCGGCGCACGACAGCAGAGAATGAGTTTGTGGTGCTTAAGAAGGATGCAGATGCAGCCTACGCAGT
CAAGGTGGAGCTTCAGGCCAAAGTGGACTCACTGGACAAAGAAATCAAGTTCCTCAAGTGTCTGTATGAT
GCAGAGATCGCTCAGATCCAGACTCACGCCAGTGAGACCTCTGTCATCCTGTCCATGGACAACAACCGGG
ACCTGGACCTTGACAGCATCATCGCTGAGGTCCGCATGCATTATGAGGAGATCGCCCTGAAGAGCAAGGC
CGAGGCCGAGGCCCTGTACCAGACCAAGATCCAGGAGCTGCAGCTGGCAGCCAGTCGGCATGGTGACGAC
CTGAAACACACCAGGAGCGAGATGGTGGAGCTGAACCGGCTCATCCAGAGGATCCGGTGTGAGATCGGGA
ATGTGAAGAAGCAGCGTGCCAGCCTGGAGACGGCCATCGCTGACGCTGAGCAGCGGGGAGACAATGCCCT
GAAGGATGCCCAGGCCAAGCTGGATGAGCTGGAGGGCGCCCTGCACCAGGCCAAGGAGGAGCTGGCGCGG
ATGCTGCGCGAGTACCAGGAGCTCATGAGCCTGAAACTGGCCCTGGACATGGAGATTGCCACCTACCGCA
AGCTGCTGGAGGGCGAGGAGTGCAGGATGTCTGGTGAGAATCCATCCTCTGTGAGCATCTCTGTCATCAG
CAGTAGCAGCTACAGCTACCACCACCCCAGCTCTGCGGGTGTTGACCTTGGGGCCAGCGCTGTGGCAGGC
AGCTCTGGCAGCACCCAGAGCGGGCAGACCAAGACCACAGAGGCGCGAGGGGGAGACCTCAAGGACACCC
AGGGCAAGAGCACCCCAGCCAGCATCCCAGCAAGGAAAGCCACCCGCTAG

Translation (529 aa):
MSRQLNIKSSGDKGNFSVHSAVVPRKAVGSLASYCAAGRGAGAGFGSRSLYSLGGNRRISFNVAGGGVRA
GGYGFRPGSGYGGGRASGFAGSMFGSVALGPACLSVCPPGGIHQVTVNKSLLAPLNVELDPEIQKVRAQE
REQIKVLNDKFASFIDKVRFLEQQNQVLETKWELLQQLDLNNCKKNLEPILEGYISNLRKQLETLSGDRV
RLDSELRSMRDLVEDYKKRYEVEINRRTTAENEFVVLKKDADAAYAVKVELQAKVDSLDKEIKFLKCLYD
AEIAQIQTHASETSVILSMDNNRDLDLDSIIAEVRMHYEEIALKSKAEAEALYQTKIQELQLAASRHGDD
LKHTRSEMVELNRLIQRIRCEIGNVKKQRASLETAIADAEQRGDNALKDAQAKLDELEGALHQAKEELAR
MLREYQELMSLKLALDMEIATYRKLLEGEECRMSGENPSSVSISVISSSSYSYHHPSSAGVDLGASAVAG
SSGSTQSGQTKTTEARGGDLKDTQGKSTPASIPARKATR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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