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Report for CCDS86983.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
86983.1 Public Homo sapiens 21 TIAM1 24 110 108 CCDS HistoryNCBI Gene:7074Re-query CCDS DB by CCDS ID:86983.1Re-query CCDS DB by GeneID:7074See the combined annotation on chromosome 21 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 86983.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000636887.1 ENSP00000490786.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000636887.1Link to Ensembl Protein Viewer:ENSP00000490786.1Re-query CCDS DB by Nucleotide ID:ENST00000636887Re-query CCDS DB by Protein ID:ENSP00000490786
Original member Current member NCBI NM_001353684.2 NP_001340613.1 Accepted alive Link to Nucleotide Sequence:NM_001353684.2Link to Protein Sequence:NP_001340613.1Re-query CCDS DB by Nucleotide ID:NM_001353684Re-query CCDS DB by Protein ID:NP_001340613Link to BLAST:NP_001340613.1

Chromosomal Locations for CCDS 86983.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 21 (NC_000021.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21See the combined annotation on chromosome 21 in Sequence Viewer

Chromosome Start Stop Links
21 31120368 31120837 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 31124522 31124694 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 31127065 31127152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 31130213 31130315 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 31130890 31130948 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 31135933 31136041 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 31141118 31141236 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 31141325 31141504 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 31146895 31147003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 31152636 31152761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 31153066 31153134 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 31154247 31154426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 31160445 31160534 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1875 nt):
ATGATGTCTGCACTGTGGAAAATAAAGCGCAAGCCCAGGATTGAAAACAATGACAAGTCCGGTGACTCTA
TGTATCGAACACTTCATCTGAGTACAGAACAGGTGGCCGCATTTTGCCGCAGTTTGCATGAGATGAACCC
CTCTGACCAGAGCCCATCTCCTCAGGACTCCACGGGGCCTCAGCTGGCGACCATGAGACAACTCTCGGAT
GCAGATAAGCTGCGCAAGGTGATCTGCGAGCTCCTGGAGACGGAGCGCACCTACGTGAAGGATTTAAACT
GTCTTATGGAGAGATACCTAAAGCCTCTTCAAAAAGAAACTTTTCTCACCCAGGATGAGCTTGACGTGCT
TTTTGGAAATTTAACGGAAATGGTAGAGTTTCAAGTAGAATTCCTTAAAACTCTAGAAGATGGAGTGAGA
CTGGTACCTGATTTGGAAAAGCTTGAGAAGGTTGATCAATTTAAGAAAGTGCTGTTCTCTCTGGGGGGAT
CATTCCTGTATTATGCTGACCGCTTCAAGCTCTACAGTGCCTTCTGCGCCAGCCACACAAAAGTTCCCAA
GGTCCTGGTGAAAGCCAAGACAGACACGGCTTTCAAGGCATTCTTGGATGCCCAGAACCCGAAGCAGCAG
CACTCATCCACGCTGGAGTCGTACCTCATCAAGCCCATCCAGAGGATCCTCAAGTACCCACTTCTGCTCA
GGGAGCTGTTCGCCCTGACCGATGCGGAGAGCGAGGAGCACTACCACCTGGACGTGGCCATCAAGACCAT
GAACAAGGTTGCCAGTCACATCAATGAGATGCAGAAAATCCATGAAGAGTTTGGGGCTGTGTTTGACCAG
CTGATTGCTGAACAGACTGGTGAGAAAAAAGAGGTTGCAGATCTGAGCATGGGAGACCTGCTTTTGCACA
CTACCGTGATCTGGCTGAACCCGCCGGCCTCGCTGGGCAAGTGGAAAAAGGAACCAGAGTTGGCAGCATT
CGTCTTCAAAACTGCTGTGGTCCTTGTGTATAAAGATGGTTCCAAACAGAAGAAGAAACTTGTAGGATCT
CACAGGCTTTCCATTTATGAGGACTGGGACCCCTTCAGATTTCGACACATGATCCCCACGGAAGCGCTGC
AGGTTCGAGCTTTGGCGAGTGCAGATGCAGAGGCAAATGCCGTGTGTGAAATTGTCCATGTAAAATCCGA
GTCTGAAGGGAGGCCGGAGAGGGTCTTTCACTTGTGCTGCAGCTCCCCAGAGAGCCGAAAGGATTTCCTA
AAGGCTGTGCATTCAATCCTGCGTGATAAGCACAGAAGACAGCTCCTCAAAACCGAGAGCCTTCCCTCAT
CCCAGCAATATGTCCCTTTTGGAGGCAAAAGATTGTGTGCACTGAAGGGGGCCAGGCCGGCCATGAGCAG
GGCAGTGTCTGCCCCAAGCAAGTCTCTTGGGAGGAGGAGGCGGCGGCTGGCTCGAAACAGGTTTACCATT
GATTCTGATGCCGTCTCCGCAAGCAGCCCGGAGAAAGAGTCCCAGCAGCCCCCCGGTGGTGGGGACACTG
ACCGATGGGTAGAGGAGCAGTTTGATCTTGCTCAGTATGAGGAGCAAGATGACATCAAGGAGACAGACAT
CCTCAGTGACGATGATGAGTTCTGTGAGTCCGTGAAGGGTGCCTCAGTGGACAGAGACCTGCAGGAGCGG
CTTCAGGCCACCTCCATCAGTCAGCGGGAAAGAGGCCGGAAAACCCTGGATAGTCACGCGTCCCGCATGG
CACAGCTCAAGAAGCAAGCTGCCCTGTCGGGGATCAATGGAGGCCTGGAGAGCGCAAGCGAGGAAGTCAT
TTGGGTTAGGCGTGAAGACTTTGCCCCCTCCAGGAAACTGAACACTGAGATCTGA

Translation (624 aa):
MMSALWKIKRKPRIENNDKSGDSMYRTLHLSTEQVAAFCRSLHEMNPSDQSPSPQDSTGPQLATMRQLSD
ADKLRKVICELLETERTYVKDLNCLMERYLKPLQKETFLTQDELDVLFGNLTEMVEFQVEFLKTLEDGVR
LVPDLEKLEKVDQFKKVLFSLGGSFLYYADRFKLYSAFCASHTKVPKVLVKAKTDTAFKAFLDAQNPKQQ
HSSTLESYLIKPIQRILKYPLLLRELFALTDAESEEHYHLDVAIKTMNKVASHINEMQKIHEEFGAVFDQ
LIAEQTGEKKEVADLSMGDLLLHTTVIWLNPPASLGKWKKEPELAAFVFKTAVVLVYKDGSKQKKKLVGS
HRLSIYEDWDPFRFRHMIPTEALQVRALASADAEANAVCEIVHVKSESEGRPERVFHLCCSSPESRKDFL
KAVHSILRDKHRRQLLKTESLPSSQQYVPFGGKRLCALKGARPAMSRAVSAPSKSLGRRRRRLARNRFTI
DSDAVSASSPEKESQQPPGGGDTDRWVEEQFDLAQYEEQDDIKETDILSDDDEFCESVKGASVDRDLQER
LQATSISQRERGRKTLDSHASRMAQLKKQAALSGINGGLESASEEVIWVRREDFAPSRKLNTEI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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