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Report for CCDS44440.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44440.1 Public Homo sapiens 10 ZSWIM8 24 110 108 CCDS HistoryNCBI Gene:23053Re-query CCDS DB by CCDS ID:44440.1Re-query CCDS DB by GeneID:23053See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 44440.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000398706.6 ENSP00000381693.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000398706.6Link to Ensembl Protein Viewer:ENSP00000381693.2Re-query CCDS DB by Nucleotide ID:ENST00000398706Re-query CCDS DB by Protein ID:ENSP00000381693
Original member Current member NCBI NM_015037.4 NP_055852.2 Accepted alive Link to Nucleotide Sequence:NM_015037.4Link to Protein Sequence:NP_055852.2Re-query CCDS DB by Nucleotide ID:NM_015037Re-query CCDS DB by Protein ID:NP_055852Link to BLAST:NP_055852.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055852.2 1842 A7E2V4-4 1842 100% 0 0

Chromosomal Locations for CCDS 44440.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 73785879 73786086 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73788670 73788823 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73789096 73789190 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73789367 73789539 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73789717 73789824 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73789956 73790037 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73790172 73790292 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73790975 73791176 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73791324 73791499 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73791859 73792852 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73793588 73793719 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73793865 73794044 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73794147 73794330 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73794541 73794639 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73795539 73795663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73796774 73797014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73797113 73797271 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73797377 73797605 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73797781 73798070 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73798230 73798453 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73799002 73799490 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73800011 73800194 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73800296 73800472 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73800640 73800759 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73801017 73801195 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73801316 73801519 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5529 nt):
ATGGAGCTGATGTTTGCAGAGTGGGAGGACGGAGAGCGCTTCTCATTCGAGGATTCGGACCGTTTTGAGG
AGGATTCACTCTGTTCCTTCATCTCCGAGGCCGAGAGCCTCTGCCAGAACTGGCGGGGATGGCGCAAACA
GTCAGCGGGGCCCAATTCCCCCACTGGCGGCGGTGGCGGAGGTGGCAGTGGCGGTACCAGAATGCGAGAT
GGACTGGTGATCCCATTGGTGGAGCTGTCAGCAAAGCAGGTGGCATTTCATATCCCATTTGAAGTGGTGG
AGAAAGTTTACCCACCAGTGCCTGAGCAGCTACAGCTCCGAATTGCTTTTTGGAGCTTCCCTGAGAATGA
AGAGGACATTCGGCTGTATTCGTGCCTGGCCAATGGCAGTGCGGATGAGTTTCAGCGAGGGGATCAGCTC
TTCCGCATGCGGGCTGTGAAGGACCCATTGCAGATAGGGTTCCACCTGAGTGCTACAGTGGTGCCACCTC
AGATGGTCCCTCCTAAAGGGGCCTACAACGTGGCTGTGATGTTTGACCGCTGCCGGGTCACTTCCTGCAG
CTGTACCTGTGGGGCTGGGGCCAAATGGTGCACCCACGTCGTGGCACTCTGTCTCTTCCGCATCCACAAC
GCTTCTGCAGTCTGCCTGCGAGCCCCAGTCTCAGAGTCCCTGTCCCGGCTACAGAGGGACCAGCTGCAAA
AGTTTGCTCAGTACCTCATCAGTGAGCTCCCTCAGCAGATCCTCCCCACAGCTCAGCGTCTCCTGGACGA
ACTCCTGTCTTCCCAGTCAACAGCCATCAATACAGTGTGTGGAGCTCCGGACCCCACAGCAGGGCCCTCA
GCATCGGACCAGAGTACTTGGTATCTGGATGAATCGACACTCACTGACAACATCAAAAAGACACTGCACA
AGTTCTGTGGCCCCTCCCCTGTGGTCTTCAGTGATGTGAACTCCATGTATCTGTCTTCCACGGAGCCGCC
AGCCGCTGCTGAATGGGCATGTCTGCTGCGCCCTCTGAGGGGCCGTGAGCCAGAGGGCGTCTGGAACCTG
CTAAGCATTGTGCGGGAGATGTTCAAGCGGAGGGACAGCAATGCTGCCCCCTTGTTGGAAATCCTCACTG
ACCAGTGCCTCACCTATGAACAGATAACAGGTTGGTGGTATAGCGTACGTACCTCAGCCTCACACAGCAG
TGCCAGTGGGCACACGGGCCGTAGCAACGGGCAGTCAGAGGTGGCAGCCCATGCCTGTGCCAGCATGTGT
GACGAGATGGTCACACTGTGGAGGCTGGCCGTGCTGGACCCTGCACTCAGCCCCCAGCGGCGCCGGGAAC
TGTGTACGCAGCTGCGGCAGTGGCAACTGAAGGTGATTGAGAACGTCAAGCGGGGCCAACACAAGAAGAC
GCTGGAGCGGCTCTTCCCCGGCTTCCGGCCAGCGGTGGAGGCCTGCTACTTCAACTGGGAAGAGGCCTAC
CCACTTCCTGGTGTCACCTACAGCGGCACTGACAGGAAGCTGGCACTGTGCTGGGCCCGGGCCCTGCCCT
CTCGGCCAGGTGCCTCCCGCTCTGGGGGCCTGGAGGAATCCCGGGACCGGCCCCGACCCCTTCCTACTGA
GCCAGCTGTGCGGCCCAAGGAGCCTGGGACCAAGCGAAAGGGCTTGGGTGAGGGGGTCCCCTCATCACAG
CGGGGTCCCCGCCGCCTCTCAGCTGAAGGGGGAGATAAAGCTCTACATAAGATGGGTCCAGGTGGGGGCA
AAGCCAAGGCACTGGGTGGGGCTGGCAGTGGGAGCAAGGGCTCAGCAGGTGGCGGAAGCAAGCGACGGCT
GAGCAGCGAAGACAGCTCCCTGGAGCCAGACCTGGCCGAGATGAGCCTGGATGACAGCAGCCTGGCCCTG
GGCGCAGAGGCCAGCACCTTCGGGGGATTCCCTGAGAGCCCTCCACCCTGTCCTCTCCACGGTGGCTCCC
GAGGCCCTTCCACTTTCCTTCCTGAGCCCCCAGATACTTATGAAGAAGATGGTGGTGTGTACTTCTCGGA
AGGGCCTGAGCCTCCCACAGCCTCTGTTGGCCCCCCTGGCCTACTGCCTGGGGATGTCTGTACCCAGGAC
GACCTCCCTTCTACAGATGAGAGTGGCAATGGGCTTCCCAAAACCAAAGAGGCAGCCCCTGCAGTTGGAG
AGGAGGATGATGACTACCAGGCGTACTATCTGAATGCCCAGGATGGGGCTGGGGGCGAGGAAGAGAAGGC
CGAGGGCGGGGCTGGGGAGGAGCACGACCTGTTTGCTGGGCTGAAGCCACTGGAACAGGAGAGTCGCATG
GAGGTACTGTTTGCCTGTGCTGAGGCCCTGCATGCGCATGGCTATAGCAGTGAGGCCTCCCGTCTCACTG
TGGAGCTTGCCCAGGATCTGCTAGCCAACCCACCCGACCTCAAGGTAGAGCCGCCCCCTGCCAAGGGCAA
GAAGAACAAGGTATCCACGAGCCGTCAGACCTGGGTGGCTACCAACACCCTGAGCAAGGCGGCCTTCCTG
TTGACAGTGCTAAGTGAGCGTCCAGAGCACCACAACCTGGCCTTCCGAGTTGGCATGTTTGCCTTGGAGC
TACAGAGGCCTCCAGCTTCTACCAAGGCCTTGGAGGTGAAGCTGGCATACCAGGAGTCTGAGGTGGCTGC
CCTGCTCAAGAAGATCCCTCTGGGTCCAAGTGAGATGAGTACCATGCGGTGCCGGGCAGAGGAACTTCGG
GAGGGGACACTCTGTGACTATCGGCCTGTGTTGCCTCTCATGCTGGCCAGTTTCATCTTTGACGTTCTCT
GTGCTCCAGTGGTTTCTCCCACAGGTTCCCGGCCCCCAAGTCGCAACTGGAACAGCGAGACACCTGGGGA
TGAGGAGCTTGGATTTGAAGCAGCAGTTGCTGCCTTGGGCATGAAGACAACAGTGAGCGAGGCAGAACAT
CCCCTCTTATGTGAAGGCACACGTCGGGAGAAGGGTGACCTGGCATTAGCACTAATGATCACTTACAAGG
ACGACCAGGCCAAGCTTAAGAAGATCTTAGACAAACTCTTGGACCGAGAGAGCCAGACACATAAGCCACA
GACGCTGAGTTCTTTCTACTCATCTAGCCGCCCAACCACAGCCAGCCAGAGGTCTCCTTCAAAGCACGGG
GGCCCATCTGCCCCAGGGGCCCTGCAACCACTGACCTCAGGCTCTGCAGGGCCTGCTCAACCAGGGAGTG
TGGCAGGGGCTGGGCCAGGCCCCACTGAGGGCTTCACAGAGAAGAATGTGCCTGAGAGTTCCCCACATTC
CCCCTGTGAGGGTCTTCCATCTGAGGCAGCTTTGACCCCAAGGCCAGAAGGGAAGGTTCCTAGCCGCTTG
GCACTTGGCAGTCGTGGAGGCTATAATGGACGGGGATGGGGGTCCCCAGGACGGCCTAAGAAGAAGCACA
CAGGCATGGCCAGCATTGACAGCAGTGCCCCTGAAACAACATCGGATAGTTCCCCCACCTTAAGCCGGAG
ACCACTTCGAGGGGGCTGGGCCCCCACCTCCTGGGGTCGAGGTCAGGACAGTGACAGCATTAGCAGCTCT
TCTTCGGACTCCCTGGGCTCCTCATCCTCCAGTGGAAGTCGCCGGGCCAGTGCCAGTGGAGGAGCCCGGG
CGAAGACTGTTGAAGTTGGCAGGTACAAGGGCCGCCGCCCCGAGAGTCATGCCCCTCATGTACCCAATCA
GCCATCAGAGGCAGCTGCACACTTCTACTTCGAGCTGGCGAAGACAGTGCTGATCAAGGCAGGGGGCAAC
AGCAGCACTTCCATTTTCACACATCCATCTTCCTCAGGGGGCCACCAGGGTCCTCACCGCAACCTGCACC
TTTGCGCCTTCGAGATTGGGCTTTATGCCCTTGGCCTGCACAACTTTGTTTCTCCCAACTGGCTCTCACG
TACTTATTCTTCCCACGTTTCCTGGATTACAGGCCAGGCCATGGAGATAGGCAGCGCAGCCCTGACTATA
CTGGTAGAATGCTGGGATGGGCACCTGACACCCCCTGAGGTTGCATCCCTGGCTGACAGGGCATCACGGG
CAAGAGACTCCAATATGGTGAGGGCGGCAGCAGAGCTGGCCCTGAGCTGCCTGCCTCACGCCCATGCATT
GAACCCTAATGAGATCCAGCGGGCCCTGGTGCAGTGCAAGGAACAGGACAACCTGATGTTGGAGAAGGCC
TGCATGGCAGTGGAAGAGGCAGCTAAGGGTGGGGGCGTGTACCCTGAAGTGTTGTTTGAGGTTGCTCACC
AGTGGTTCTGGCTGTATGAGCAAACTGCAGGTGGCTCATCCACAGCCCGTGAAGGGGCTACAAGCTGTAG
TGCCAGTGGGATCAGGGCAGGTGGGGAAGCTGGGCGGGGTATGCCTGAGGGTAGAGGGGGCCCAGGGACT
GAGCCGGTTACAGTGGCAGCGGCAGCAGTGACAGCAGCAGCCACAGTGGTGCCCGTCATATCGGTGGGGT
CTAGTTTATACCCGGGTCCAGGACTGGGGCATGGCCACTCCCCTGGCCTGCACCCCTACACTGCTCTACA
GCCCCACCTGCCCTGTAGCCCTCAGTATCTCACTCACCCAGCTCACCCTGCCCACCCCATGCCTCACATG
CCCCGGCCTGCCGTCTTCCCTGTGCCCAGCTCTGCATACCCACAGGGTGTGCATCCTGCATTCCTAGGGG
CTCAGTACCCTTATTCAGTGACTCCTCCCTCACTTGCTGCCACTGCTGTGTCTTTCCCCGTTCCTTCCAT
GGCACCCATCACAGTACATCCCTACCACACAGAGCCAGGGCTTCCACTGCCCACCAGTGTGGCCTGTGAG
TTGTGGGGCCAGGGAACAGTGAGCAGTGTCCATCCAGCATCCACGTTTCCAGCCATCCAAGGTGCCTCAC
TGCCTGCCCTGACCACACAGCCCAGCCCTCTGGTGAGCGGAGGTTTTCCACCGCCCGAGGAGGAGACACA
CAGTCAGCCAGTCAATCCCCACAGCCTGCACCACCTGCATGCTGCCTACCGTGTCGGAATGCTGGCACTG
GAGATGCTGGGTCGCCGGGCACACAACGATCACCCCAACAACTTCTCCCGCTCCCCCCCCTACACTGATG
ATGTCAAATGGTTGCTGGGGCTGGCAGCAAAGCTGGGAGTGAACTACGTGCACCAGTTCTGTGTGGGGGC
AGCCAAGGGGGTGCTGAGCCCGTTTGTGCTGCAGGAGATCGTCATGGAGACGCTGCAGCGGCTGAGTCCC
GCTCATGCCCACAACCACCTGCGTGCCCCGGCCTTCCACCAACTGGTGCAGCGCTGCCAGCAGGCATACA
TGCAGTACATCCACCACCGCTTGATTCACCTGACTCCTGCGGACTACGACGACTTTGTGAATGCGATCCG
GAGTGCCCGCAGCGCCTTCTGCCTGACGCCCATGGGCATGATGCAGTTCAACGACATCCTACAGAACCTC
AAGCGCAGCAAACAGACCAAGGAGCTGTGGCAGCGGGTCTCACTCGAGATGGCCACCTTCTCCCCCTGA

Translation (1842 aa):
MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTGGGGGGGSGGTRMRD
GLVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAFWSFPENEEDIRLYSCLANGSADEFQRGDQL
FRMRAVKDPLQIGFHLSATVVPPQMVPPKGAYNVAVMFDRCRVTSCSCTCGAGAKWCTHVVALCLFRIHN
ASAVCLRAPVSESLSRLQRDQLQKFAQYLISELPQQILPTAQRLLDELLSSQSTAINTVCGAPDPTAGPS
ASDQSTWYLDESTLTDNIKKTLHKFCGPSPVVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGVWNL
LSIVREMFKRRDSNAAPLLEILTDQCLTYEQITGWWYSVRTSASHSSASGHTGRSNGQSEVAAHACASMC
DEMVTLWRLAVLDPALSPQRRRELCTQLRQWQLKVIENVKRGQHKKTLERLFPGFRPAVEACYFNWEEAY
PLPGVTYSGTDRKLALCWARALPSRPGASRSGGLEESRDRPRPLPTEPAVRPKEPGTKRKGLGEGVPSSQ
RGPRRLSAEGGDKALHKMGPGGGKAKALGGAGSGSKGSAGGGSKRRLSSEDSSLEPDLAEMSLDDSSLAL
GAEASTFGGFPESPPPCPLHGGSRGPSTFLPEPPDTYEEDGGVYFSEGPEPPTASVGPPGLLPGDVCTQD
DLPSTDESGNGLPKTKEAAPAVGEEDDDYQAYYLNAQDGAGGEEEKAEGGAGEEHDLFAGLKPLEQESRM
EVLFACAEALHAHGYSSEASRLTVELAQDLLANPPDLKVEPPPAKGKKNKVSTSRQTWVATNTLSKAAFL
LTVLSERPEHHNLAFRVGMFALELQRPPASTKALEVKLAYQESEVAALLKKIPLGPSEMSTMRCRAEELR
EGTLCDYRPVLPLMLASFIFDVLCAPVVSPTGSRPPSRNWNSETPGDEELGFEAAVAALGMKTTVSEAEH
PLLCEGTRREKGDLALALMITYKDDQAKLKKILDKLLDRESQTHKPQTLSSFYSSSRPTTASQRSPSKHG
GPSAPGALQPLTSGSAGPAQPGSVAGAGPGPTEGFTEKNVPESSPHSPCEGLPSEAALTPRPEGKVPSRL
ALGSRGGYNGRGWGSPGRPKKKHTGMASIDSSAPETTSDSSPTLSRRPLRGGWAPTSWGRGQDSDSISSS
SSDSLGSSSSSGSRRASASGGARAKTVEVGRYKGRRPESHAPHVPNQPSEAAAHFYFELAKTVLIKAGGN
SSTSIFTHPSSSGGHQGPHRNLHLCAFEIGLYALGLHNFVSPNWLSRTYSSHVSWITGQAMEIGSAALTI
LVECWDGHLTPPEVASLADRASRARDSNMVRAAAELALSCLPHAHALNPNEIQRALVQCKEQDNLMLEKA
CMAVEEAAKGGGVYPEVLFEVAHQWFWLYEQTAGGSSTAREGATSCSASGIRAGGEAGRGMPEGRGGPGT
EPVTVAAAAVTAAATVVPVISVGSSLYPGPGLGHGHSPGLHPYTALQPHLPCSPQYLTHPAHPAHPMPHM
PRPAVFPVPSSAYPQGVHPAFLGAQYPYSVTPPSLAATAVSFPVPSMAPITVHPYHTEPGLPLPTSVACE
LWGQGTVSSVHPASTFPAIQGASLPALTTQPSPLVSGGFPPPEEETHSQPVNPHSLHHLHAAYRVGMLAL
EMLGRRAHNDHPNNFSRSPPYTDDVKWLLGLAAKLGVNYVHQFCVGAAKGVLSPFVLQEIVMETLQRLSP
AHAHNHLRAPAFHQLVQRCQQAYMQYIHHRLIHLTPADYDDFVNAIRSARSAFCLTPMGMMQFNDILQNL
KRSKQTKELWQRVSLEMATFSP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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