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Report for CCDS15264.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15264.1 Public Mus musculus 1 Il19 23 108 98 CCDS HistoryNCBI Gene:329244Re-query CCDS DB by CCDS ID:15264.1Re-query CCDS DB by GeneID:329244See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15264.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000016668.12 ENSMUSP00000016668.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000016668.12Link to Ensembl Protein Viewer:ENSMUSP00000016668.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000016668Re-query CCDS DB by Protein ID:ENSMUSP00000016668
Original member Current member EBI ENSMUST00000112465.1 ENSMUSP00000108084.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000112465.1Link to Ensembl Protein Viewer:ENSMUSP00000108084.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000112465Re-query CCDS DB by Protein ID:ENSMUSP00000108084
Original member Current member EBI ENSMUST00000187410.6 ENSMUSP00000139406.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000187410.6Link to Ensembl Protein Viewer:ENSMUSP00000139406.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000187410Re-query CCDS DB by Protein ID:ENSMUSP00000139406
Original member Current member NCBI NM_001009940.2 NP_001009940.1 Accepted alive Link to Nucleotide Sequence:NM_001009940.2Link to Protein Sequence:NP_001009940.1Re-query CCDS DB by Nucleotide ID:NM_001009940Re-query CCDS DB by Protein ID:NP_001009940Link to BLAST:NP_001009940.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001009940.1 176 Q8CJ70 176 100% 0 0

Chromosomal Locations for CCDS 15264.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 130933148 130933243 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 130934975 130935049 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 130935893 130936045 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 130938917 130938979 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 130939098 130939241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (531 nt):
ATGAAGACACAGTGCGCGTCTACCTGGCTCCTGGGCATGACGTTGATTCTCTGCTCAGTTCATATCTACA
GTCTTAGGAGATGTCTGATTTCTGTGGACATGCGCCTCATAGAAAAGAGTTTCCACGAGATCAAGAGAGC
CATGCAAACTAAGGACACCTTTAAAAATGTCACCATCCTGTCCCTGGAGAACCTCAGGAGCATTAAGCCT
GGAGATGTGTGCTGCATGACCAACAACCTGCTGACATTCTACAGAGACAGGGTGTTCCAGGACCATCAGG
AGAGAAGCCTTGAGGTCTTAAGGAGAATCAGCAGCATTGCCAACTCTTTCCTCTGCGTGCAGAAATCTCT
GGAGCGATGTCAGGTGCACAGACAATGTAACTGCAGTCAGGAAGCCACCAATGCAACTAGGATCATCCAT
GACAACTACAATCAGCTGGAGGTCTCATCTGCTGCCCTTAAGTCTCTAGGAGAACTGAACATACTTTTAG
CCTGGATTGACAGGAATCATCTGGAAACTCCTGCAGCCTGA

Translation (176 aa):
MKTQCASTWLLGMTLILCSVHIYSLRRCLISVDMRLIEKSFHEIKRAMQTKDTFKNVTILSLENLRSIKP
GDVCCMTNNLLTFYRDRVFQDHQERSLEVLRRISSIANSFLCVQKSLERCQVHRQCNCSQEATNATRIIH
DNYNQLEVSSAALKSLGELNILLAWIDRNHLETPAA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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