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Report for CCDS19206.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
19206.1 Public Mus musculus 5 Tmem129 23 108 98 CCDS HistoryNCBI Gene:68366Re-query CCDS DB by CCDS ID:19206.1Re-query CCDS DB by GeneID:68366See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 19206.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000019439.8 ENSMUSP00000019439.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000019439.8Link to Ensembl Protein Viewer:ENSMUSP00000019439.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000019439Re-query CCDS DB by Protein ID:ENSMUSP00000019439
Original member Current member NCBI NM_026698.3 NP_080974.2 Accepted alive Link to Nucleotide Sequence:NM_026698.3Link to Protein Sequence:NP_080974.2Re-query CCDS DB by Nucleotide ID:NM_026698Re-query CCDS DB by Protein ID:NP_080974Link to BLAST:NP_080974.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_080974.2 362 Q8K304-1 362 100% 0 0

Chromosomal Locations for CCDS 19206.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 5 (NC_000071.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 33654366 33654614 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 33654713 33654872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 33655323 33655797 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 33657623 33657827 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1089 nt):
ATGGACAGCCCTGAGGTGACCTTCACGTTGGCCTACCTGGTCTTCGCAGTGTGCTTCGTGTTCACGCCCA
ACGAGTTCTACTCGGCCGGGCTCACAGTGCAGAATCTGTTGTCGGGCTGGCTGGGCAGCGAGGACGCCGC
CTTCGTACCTTACCACCTTCGCCGCACTTCCGCCACACTACTGTGTCACTCACTGCTGCCGTTAGGCTAC
TACATGGGCATGTGCTTTGCAGCCTCAGAAAAGCAGCTCTACTCCCCAGGTCAGGCCCCAGAAGCCTGGC
AACTCTTCCTTCTCCTGGCTGTGACCCTTCCCCTTCTCTCCTGTACCCTGATCTACTACTGGTCCTGGGA
TAGGTGGACCCGACACCCACTGGCCCAAACCCTGGCCCTCTATGCCCTTCCACAGTCTGGTTGGCAGGCT
GTCGCTTCTTCCATCAACACAGAGTTCCGACGGATTGACAAGTTTGCTACAGGGGCACCTGGTGCCCGAG
TGATTGTGACAGACACATGGGTAATGAAGGTGACCACATACCGTGTACATGTGGCTCAGCAACAGGATGT
TCACTTGACTGTGACAGAGTCACGGCAGCATGATCTCTCGCCAGACTCAAACCTACCTGTGCAGCTTCTT
ACTATACGTGTGGCAAGCACCAGCCCTGGCACACAGCCCTTTGATATTCGGCTGAATTCATCAGAATATG
GCGAACTATGTGAGAAGCTCCACGCCCCAATCCGAAGTGCAGCCAATGTGGTCATCCGCCAGAGCCTGGG
GGACCTCTTCCTAGAAACATTTGCTTCCCATGTGGAGGTCAACCCAGCCTATTCAGTACCCAGCAACCAG
GAGCTGGAGCCCTGTATAGGCTGCATGCAAACACGGGCCAGCGTGAAGTTGGTGAAGACCTGTCAGGAGC
CAGCGGTCGGCGAGTGCCAGCAGTGTTACTGCCGACCCATGTGGTGTCTCACTTGCATGGGCAAGTGGTT
TGCCAGCCGCCAGGATCCCCAGCGCCCTGACACTTGGCTAGCCAGCCGTGTGCCCTGCCCCACTTGCCGT
GCCCGCTTCTGCATCCTGGATGTGTGCTGTGTACGCTGA

Translation (362 aa):
MDSPEVTFTLAYLVFAVCFVFTPNEFYSAGLTVQNLLSGWLGSEDAAFVPYHLRRTSATLLCHSLLPLGY
YMGMCFAASEKQLYSPGQAPEAWQLFLLLAVTLPLLSCTLIYYWSWDRWTRHPLAQTLALYALPQSGWQA
VASSINTEFRRIDKFATGAPGARVIVTDTWVMKVTTYRVHVAQQQDVHLTVTESRQHDLSPDSNLPVQLL
TIRVASTSPGTQPFDIRLNSSEYGELCEKLHAPIRSAANVVIRQSLGDLFLETFASHVEVNPAYSVPSNQ
ELEPCIGCMQTRASVKLVKTCQEPAVGECQQCYCRPMWCLTCMGKWFASRQDPQRPDTWLASRVPCPTCR
ARFCILDVCCVR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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