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Report for CCDS37564.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37564.1 Public Mus musculus 17 Zfp81 23 108 98 CCDS HistoryNCBI Gene:224694Re-query CCDS DB by CCDS ID:37564.1Re-query CCDS DB by GeneID:224694See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37564.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000054072.8 ENSMUSP00000050728.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000054072.8Link to Ensembl Protein Viewer:ENSMUSP00000050728.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000054072Re-query CCDS DB by Protein ID:ENSMUSP00000050728
Original member Current member NCBI NM_207541.1 NP_997424.1 Accepted alive Link to Nucleotide Sequence:NM_207541.1Link to Protein Sequence:NP_997424.1Re-query CCDS DB by Nucleotide ID:NM_207541Re-query CCDS DB by Protein ID:NP_997424Link to BLAST:NP_997424.1

Chromosomal Locations for CCDS 37564.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 33334243 33335653 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 33336455 33336509 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 33336722 33336848 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 33358734 33358736 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1596 nt):
ATGGAACCAGTGACCTTTGAGGATGTGGCTGTGAACTTCACCTTAGGAGAGTGGGCTTTGTTGGATTCTT
ATCAAAAGGAGCTCTACAGAGATGTGATGAAGGAAACCTTTAGCAACCTGATCTCCATAGGGAAAAGCGA
GGAAGACAATATTGAAGATTACCAAAATATTAGGAGAAATTTGAGCACTCTCATGGTTGAAGGATTCTAT
GAATTTGAACGTGGTATTCAGTATAGAGAAATGCACCAACAGATTCAAGAGCATATCGTTAATAAGTACA
TACCTCCCGGAATAGTAGTATATGAAAACAGTGCAAGTAAAAATGATGTCATTGGTCTTTCACAGTCAGA
TGTGCACCTCAGACTACTAACTGTAGAGAAACCATATGAGTATCAGAAATGTATGGAAAAGCCTATTAAG
CATAAGAAATATTGGAAAGATCTTGCATATTCTGAGTCTTTTCTTGCCCATGAGAATCCTCCCAAAGAGA
AACCATATGGAAATAAACAGTCTAATGACCCCTGTAGGAGTCTCACTTCTGATCAAGATTATGAGACAAC
ACATACTGGTGATAACCTCCATGAATACAAGCAATTTGAAACGGCTATCATGACATGTAGTTATGGTCAG
TCATATGAAAGAATCCAAACTGGAGAAAAACCATTTGTGTGTAAGCAGTGTGGAGAAGCCTTTGTTAATT
CCAGTCACCTTATCAAACATTATAAAATTCATACCAGAGAGAAGACATTTGCATGTAAATATTGTGGGAA
AGCTTTCATTCATCCAAGGGCCTGTTATAACCATGAACGAACTCATACTGGAGACAGACCTTATGTGTGT
AAACAATGTGGGAAAGCATGTATTCATTCTTACCACCTTCTCCAACATGAAAGAAGTCATACCCGAGAAA
AACTTTATGCGTGTAAGCAGTGTGGGAAAGTATTCGGACGTTCTTCGTACCTTCGCAAACATGAAAGAAT
TCACACTGGAGAGAAACCGTATTTATGTAAGCACTGTGGGAAAGCCTTCAGTGATCCCACAACCCGTAAC
AATCATGAGAGAACTCATACCGGAGAGAAGCACTATGTTTGTAAGCAGTGTGGGAAAGCATTCATTCGTT
CTTCTCAGCTTCTGATCCATGAAAGAATTCACACTGGAGAGAAACCTTACTCCTGTAAGCACTGTGGGAA
AGCCTTCACCTATTCCAGTGCCTGTTACATTCATGAGAGAATTCACACTGGAGAAAAACCCTATGTGTGT
AAGCAGTGTGGAAAAGCATTTACATGTTCCACATACCTTCACAAACATGAAAGAATTCACACTGGAGAGA
AACCGTATTCATGTAAGCAATGTGGGAAAGCCTTCATCCAACATAGGGCTTGTTACAATCATGAAAGAAT
TCACACTGGAGAAAAACCCTATGTGTGTGTGCAATGTGGGCATGCATTCACTTTTTCAAAATCCCTTCAA
ATACATGAAAGAAACCACACTGGAGAGAAACCATATGTATGTAAGCAGTGTGGGAAAGCCTTCACATGTT
CTACATATCTTCACCAACATGAAAGAACTCACAGTGAAAAGAAATCTAGTGGGTAG

Translation (531 aa):
MEPVTFEDVAVNFTLGEWALLDSYQKELYRDVMKETFSNLISIGKSEEDNIEDYQNIRRNLSTLMVEGFY
EFERGIQYREMHQQIQEHIVNKYIPPGIVVYENSASKNDVIGLSQSDVHLRLLTVEKPYEYQKCMEKPIK
HKKYWKDLAYSESFLAHENPPKEKPYGNKQSNDPCRSLTSDQDYETTHTGDNLHEYKQFETAIMTCSYGQ
SYERIQTGEKPFVCKQCGEAFVNSSHLIKHYKIHTREKTFACKYCGKAFIHPRACYNHERTHTGDRPYVC
KQCGKACIHSYHLLQHERSHTREKLYACKQCGKVFGRSSYLRKHERIHTGEKPYLCKHCGKAFSDPTTRN
NHERTHTGEKHYVCKQCGKAFIRSSQLLIHERIHTGEKPYSCKHCGKAFTYSSACYIHERIHTGEKPYVC
KQCGKAFTCSTYLHKHERIHTGEKPYSCKQCGKAFIQHRACYNHERIHTGEKPYVCVQCGHAFTFSKSLQ
IHERNHTGEKPYVCKQCGKAFTCSTYLHQHERTHSEKKSSG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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