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Report for CCDS30952.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30952.1 Public Homo sapiens 1 ZNF648 24 110 108 CCDS HistoryNCBI Gene:127665Re-query CCDS DB by CCDS ID:30952.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30952.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000339948.3 ENSP00000344129.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000339948.3Link to Ensembl Protein Viewer:ENSP00000344129.3Re-query CCDS DB by Nucleotide ID:ENST00000339948Re-query CCDS DB by Protein ID:ENSP00000344129
Original member Current member NCBI NM_001009992.1 NP_001009992.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001009992.1Link to Protein Sequence:NP_001009992.1Re-query CCDS DB by Nucleotide ID:NM_001009992Re-query CCDS DB by Protein ID:NP_001009992Link to BLAST:NP_001009992.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001009992.1 568 Q5T619 568 100% 0 0

Chromosomal Locations for CCDS 30952.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 182056304 182058010 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1707 nt):
ATGGCACAAGTGGACTCCCAGGACAGGTGGGGAGAGGCGTCTCCTCTCAGCAGCTTGACTGAGGAAGCTC
ATGACACCCAGATGCTGAGCATGAACTTAGAGAGTGACGATGAAGATGGTGGGGAGGCCGAAAAAGAGGG
CACCGCTGACCCGGTGGCCTGTCCAAGGGGCAGCTCCCCAGTAACACACGAAAATCCTGACTTGCCATGG
CCCCATCCACTGGGCAAAGAGGAAGAGAAATTCTCTGACTCCTCCAGTGCTGGGGGCATGGGGCAGAAAC
CAGTGGAAATGTCTGGGAAAGCCAGTTGGAGCAGAGATGTGACAAAGATCAACGAGACCCAGGGTTCCCC
GGGAGCAAGCAGAGCTCTGGGTTCCCTTCCCAGTGGTCTCGCACACAAATTGTTAGGTCAGATGCAACCT
CTTGGGGACCGACTACCTGCGGGTGATGATGGATACTCGGGGGCAAACCAGGACGCAGTCTTGGATGTCC
CACCCAGCTTCCCCAGCAATGGAAAGTATCTCTGTGCGCACAAAAGTGTAGACACGTCCGCAGGGAACTC
TTCTCTGTTGTGTTTCCCCAGGCCGGGGAGCAACTGGGACCTTCCCACGCAAGAGACACATACACCAGCC
CAGGCGTCGGCCACCCCAGCCAGCCTGGCTGCCGCGGTCCTGGCAAAAGCGCGGAACAGCAGGAAAGTAC
AGAACCAGGCGGGCCGGCGCGAGGGCGGAGAGGCTGAGGCGCGTCCCTACAGGTGCCTGCGGGGCGGGCG
GGCCTTTCAGAAGCCCAGCAAGCCGCTGAGCCCCGCGGAGACGCGCGGCGGCGCCGCCAAGCGCTACGCG
TGCGAGCTATGCGGGAAGGCCTACTCCCACCGCGGCACACTCCAGCAGCACAGGCGCCTGCACACGGGCG
AGCGGCCCTACCAGTGCTCCTTCTGCGACAAGGCCTACACCTGGTCCTCCGACCACCGGAAGCACATCCG
CACCCACACAGGCGAGAAACCCTACCCGTGTCCAGACTGCGGGAAGGCCTTCGTGCGCTCTTCGGACCTG
CGCAAACACCAGCGCAACATGCACAGCAACAATAAGCCCTTCCCGTGCTCCGAGTGCGGCCTGACCTTCA
ACAAGCCGCTGTCGCTGCTGCGCCACCAGCGCACGCACCTGGGCGCCAAGCCCTTCCGCTGCCCCGCCTG
CGACCGGGAGTTCGCTGTGGCCAGCCGCATGGTGGAGCACCAGCGCGTGCACTCGGGCGAGCGGCCCTTC
CCCTGCCCCACCTGCGGCAAGTGCTTCACCAAGTCCTCCAATCTGTCCGAGCACCAGACGCTGCACACCG
GCCAGAGGCCTTTCAAGTGCGCTGACTGCGGCGTGGCCTTCGCGCAGCCCTCGCGCCTCGTGCGCCACCA
GCGCATCCACACTGGCGAGAGGCCCTTTCCTTGCACGCAGTGTGGCCAGGCCTTTGCCCGCTCTTCGACC
CTGAAGCGGCACCAACAGATCCACTCCGGGGAGAAGGGATTCCTCTGTGCCGAGTGCGGCAGGGCCTTCC
GCATTGCCTCTGAGTTGGCCCAGCACATACGAATGCACAACGGAGAGAGGCCCTACCAGTGTGAGGACTG
CGGCCAGGCCTTCACCAGGTCCAATCACCTCCAACGACACCGAGCCAAGCACGGCACCTGCAAGAAGGAG
CCCATCCCTTCCTCCTCTGACGAGTGA

Translation (568 aa):
MAQVDSQDRWGEASPLSSLTEEAHDTQMLSMNLESDDEDGGEAEKEGTADPVACPRGSSPVTHENPDLPW
PHPLGKEEEKFSDSSSAGGMGQKPVEMSGKASWSRDVTKINETQGSPGASRALGSLPSGLAHKLLGQMQP
LGDRLPAGDDGYSGANQDAVLDVPPSFPSNGKYLCAHKSVDTSAGNSSLLCFPRPGSNWDLPTQETHTPA
QASATPASLAAAVLAKARNSRKVQNQAGRREGGEAEARPYRCLRGGRAFQKPSKPLSPAETRGGAAKRYA
CELCGKAYSHRGTLQQHRRLHTGERPYQCSFCDKAYTWSSDHRKHIRTHTGEKPYPCPDCGKAFVRSSDL
RKHQRNMHSNNKPFPCSECGLTFNKPLSLLRHQRTHLGAKPFRCPACDREFAVASRMVEHQRVHSGERPF
PCPTCGKCFTKSSNLSEHQTLHTGQRPFKCADCGVAFAQPSRLVRHQRIHTGERPFPCTQCGQAFARSST
LKRHQQIHSGEKGFLCAECGRAFRIASELAQHIRMHNGERPYQCEDCGQAFTRSNHLQRHRAKHGTCKKE
PIPSSSDE


Links Key
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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