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Report for CCDS42755.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
42755.1 Public Homo sapiens 2 FAM168B 24 110 108 CCDS HistoryNCBI Gene:130074Re-query CCDS DB by CCDS ID:42755.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 42755.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000389915.4 ENSP00000374565.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000389915.4Link to Ensembl Protein Viewer:ENSP00000374565.3Re-query CCDS DB by Nucleotide ID:ENST00000389915Re-query CCDS DB by Protein ID:ENSP00000374565
Original member Current member EBI ENST00000409185.5 ENSP00000387051.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000409185.5Link to Ensembl Protein Viewer:ENSP00000387051.1Re-query CCDS DB by Nucleotide ID:ENST00000409185Re-query CCDS DB by Protein ID:ENSP00000387051
Original member Current member NCBI NM_001009993.4 NP_001009993.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001009993.4Link to Protein Sequence:NP_001009993.2Re-query CCDS DB by Nucleotide ID:NM_001009993Re-query CCDS DB by Protein ID:NP_001009993Link to BLAST:NP_001009993.2
Original member Current member NCBI NM_001321743.1 NP_001308672.1 Accepted alive Link to Nucleotide Sequence:NM_001321743.1Link to Protein Sequence:NP_001308672.1Re-query CCDS DB by Nucleotide ID:NM_001321743Re-query CCDS DB by Protein ID:NP_001308672Link to BLAST:NP_001308672.1
Original member Current member NCBI NM_001321744.1 NP_001308673.1 Accepted alive Link to Nucleotide Sequence:NM_001321744.1Link to Protein Sequence:NP_001308673.1Re-query CCDS DB by Nucleotide ID:NM_001321744Re-query CCDS DB by Protein ID:NP_001308673Link to BLAST:NP_001308673.1
Original member Current member NCBI NM_001321745.1 NP_001308674.1 Accepted alive Link to Nucleotide Sequence:NM_001321745.1Link to Protein Sequence:NP_001308674.1Re-query CCDS DB by Nucleotide ID:NM_001321745Re-query CCDS DB by Protein ID:NP_001308674Link to BLAST:NP_001308674.1
Original member Current member NCBI NM_001321746.2 NP_001308675.1 Accepted alive Link to Nucleotide Sequence:NM_001321746.2Link to Protein Sequence:NP_001308675.1Re-query CCDS DB by Nucleotide ID:NM_001321746Re-query CCDS DB by Protein ID:NP_001308675Link to BLAST:NP_001308675.1
Original member Current member NCBI NM_001321747.2 NP_001308676.1 Accepted alive Link to Nucleotide Sequence:NM_001321747.2Link to Protein Sequence:NP_001308676.1Re-query CCDS DB by Nucleotide ID:NM_001321747Re-query CCDS DB by Protein ID:NP_001308676Link to BLAST:NP_001308676.1
Original member Current member NCBI NM_001321748.2 NP_001308677.1 Accepted alive Link to Nucleotide Sequence:NM_001321748.2Link to Protein Sequence:NP_001308677.1Re-query CCDS DB by Nucleotide ID:NM_001321748Re-query CCDS DB by Protein ID:NP_001308677Link to BLAST:NP_001308677.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001009993.2 195 A1KXE4-1 195 100% 0 0
NP_001308672.1 195 A1KXE4-1 195 100% 0 0
NP_001308673.1 195 A1KXE4-1 195 100% 0 0
NP_001308674.1 195 A1KXE4-1 195 100% 0 0
NP_001308675.1 195 A1KXE4-1 195 100% 0 0
NP_001308676.1 195 A1KXE4-1 195 100% 0 0
NP_001308677.1 195 A1KXE4-1 195 100% 0 0

Chromosomal Locations for CCDS 42755.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 131052903 131053015 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 131055272 131055449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 131055553 131055695 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 131071855 131071938 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 131082577 131082646 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (588 nt):
ATGAATCCTGTTTATAGTCCTGGATCTTCTGGGGTTCCCTATGCAAATGCCAAAGGAATTGGTTATCCAG
CTGGTTTTCCCATGGGCTATGCAGCAGCAGCTCCTGCCTATTCTCCTAACATGTATCCTGGAGCGAATCC
TACCTTCCAAACAGGTTACACTCCTGGCACACCTTACAAAGTGTCCTGTTCCCCCACCAGCGGGGCTGTG
CCACCGTACTCCTCCTCCCCGAACCCCTACCAGACTGCCGTGTACCCTGTGCGAAGTGCCTACCCCCAGC
AGAGCCCGTATGCACAGCAAGGCACGTACTACACACAGCCGCTGTATGCAGCACCTCCTCACGTCATCCA
CCACACCACGGTGGTGCAGCCCAACGGCATGCCTGCAACGGTGTACCCTGCTCCCATCCCCCCTCCTAGA
GGCAACGGGGTCACCATGGGCATGGTGGCTGGGACCACCATGGCCATGTCAGCAGGTACCCTGCTGACTG
CTCACTCCCCAACTCCTGTCGCCCCCCACCCGGTCACTGTGCCCACGTACCGGGCCCCAGGAACGCCCAC
TTACAGCTATGTGCCCCCTCAGTGGTGA

Translation (195 aa):
MNPVYSPGSSGVPYANAKGIGYPAGFPMGYAAAAPAYSPNMYPGANPTFQTGYTPGTPYKVSCSPTSGAV
PPYSSSPNPYQTAVYPVRSAYPQQSPYAQQGTYYTQPLYAAPPHVIHHTTVVQPNGMPATVYPAPIPPPR
GNGVTMGMVAGTTMAMSAGTLLTAHSPTPVAPHPVTVPTYRAPGTPTYSYVPPQW


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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