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Report for CCDS21000.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21000.2 Public Mus musculus 7 Cyp2b13 23 108 98 CCDS HistoryNCBI Gene:13089Re-query CCDS DB by CCDS ID:21000.2See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 21000.2

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000005669.8 ENSMUSP00000005669.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000005669.8Link to Ensembl Protein Viewer:ENSMUSP00000005669.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000005669Re-query CCDS DB by Protein ID:ENSMUSP00000005669
Original member Current member NCBI NM_007813.2 NP_031839.2 Accepted alive Link to Nucleotide Sequence:NM_007813.2Link to Protein Sequence:NP_031839.2Re-query CCDS DB by Nucleotide ID:NM_007813Re-query CCDS DB by Protein ID:NP_031839Link to BLAST:NP_031839.2

Chromosomal Locations for CCDS 21000.2

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 26061520 26061690 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 26080598 26080760 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 26080890 26081039 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 26081649 26081809 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 26085853 26086029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 26086482 26086623 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 26088245 26088432 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 26088601 26088742 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 26095640 26095821 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1476 nt):
ATGGATCCTAGTGTCCTGCTCCTCCTTGCTGTCCTTCTGAGCTTATTTCTACTCCTGGTCAGGGGCCATG
CAAAGATCCATGGTCATCTTCCACCAGGACCCCGTCCTCTACCCCTCTTGGGGAACCTCTTGCAGATGGA
TAGAGGAGGCCTTCTTAAGTGTTTCATTCATCTTCAAGAAAAACATGGAGATGTGTTCACAGTGCACTTG
GGACCGAGGCCCGTGGTTGTGTTGTGTGGGACACAGACGATAAGGGAGGCTCTGGTGAACAACGCTGAGG
CTTTTTCTGGCCGGGGGACCATTGCTGCAGCTCAGCTAGTTATGCAGGACTATGGCATATTTTTTTCTAG
TGGGGAACGCTGGAAGACCCTTCGGCGATTCTCTCTGGCCACCATGAAAGAGTTTGGAATGGGAAAGCGG
AGTGTGGAGGAGAGGATAAAGGAGGAGGCCCAATGTTTGGTGGAGGAACTGAAGAAATACCAGGGAGCCC
CCCTGGATCCAACCTTTTTCTTCCAGTGTGTTACAGCCAATATCATCTGCTCCATTGTCTTTGGAGAGCG
CTTTGACTACACAGATGAACAGTTCCTGCGTTTGCTGAATCTGATGTATCAGATATATTCACTCTTAAGG
TCATTCTCCTGCCAGATGTTTGAGCTCTTCTCTGGTCTCTTGAAGTACTTTCCTGGTGTACACAGACAAA
TTGCTAAAAACCAGCAGGAAATCCTCAACTTCATTACCCATCGTGTGGAAAAGCACAGGGCAACCTTGGA
CCCCAGTGAGCCACGAGACTTCATCGATACCTATCTGCTGAGGATGGAGAAGGAGAAGTCAAACCACAAC
ACGGAGTTCCATCACCAGAACCTCATGATGTCTGTGCTCTCTCTCTTCTTTGCTGGAACTGAGACTACCA
GCACCACTCTCTGCTGTGGTTTCCTGCTCATGCTCATGTACCCCCATGTTGCAGAGAAAGTCCAAAAGGA
GATTGATCAGGTGATCGGCTCACACCGGCTACCAACCCTTGATGATCGCACCAAAATGCCATACACTGAT
GCAGTCATTCACGAAATTCAGAGATTTTCAGATATTGTCCCTACTGGAGCACCACACAGAGTGACCAAAG
ATACCATGTTCCGAGGGTACCTGCTCCCCAAGAACACTGAGGTGTACCCCATCCTGAGTTCAGCTCTCCA
TGACCCACAGTACTTTGAACAACCAGACAGTTTCAATCCTGACCACTTCCTGGATGCCAATGGGGCACTG
AAGAAAAGTGAAGCTTTTCTACCCTTCTCCACAGGAAAGCGCATTTGTCTTGGTGAAAGCATTGCCCGCA
ACGAATTGTTCCTTTTCTTCACGTCCATCCTCCAGAACTTCTCTGTGGCAAGCCCTGTTGCTTCTAAGGA
CATTGACCTCACTCCCAAGGAGAGTGGTATTGGAAAAATACCTCCAACGTACCAGATCTGCTTCTTGGCC
CGCTGA

Translation (491 aa):
MDPSVLLLLAVLLSLFLLLVRGHAKIHGHLPPGPRPLPLLGNLLQMDRGGLLKCFIHLQEKHGDVFTVHL
GPRPVVVLCGTQTIREALVNNAEAFSGRGTIAAAQLVMQDYGIFFSSGERWKTLRRFSLATMKEFGMGKR
SVEERIKEEAQCLVEELKKYQGAPLDPTFFFQCVTANIICSIVFGERFDYTDEQFLRLLNLMYQIYSLLR
SFSCQMFELFSGLLKYFPGVHRQIAKNQQEILNFITHRVEKHRATLDPSEPRDFIDTYLLRMEKEKSNHN
TEFHHQNLMMSVLSLFFAGTETTSTTLCCGFLLMLMYPHVAEKVQKEIDQVIGSHRLPTLDDRTKMPYTD
AVIHEIQRFSDIVPTGAPHRVTKDTMFRGYLLPKNTEVYPILSSALHDPQYFEQPDSFNPDHFLDANGAL
KKSEAFLPFSTGKRICLGESIARNELFLFFTSILQNFSVASPVASKDIDLTPKESGIGKIPPTYQICFLA
R


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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