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Report for CCDS27690.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27690.1 Public Mus musculus 15 Cyp2d10 23 108 98 CCDS HistoryNCBI Gene:13101Re-query CCDS DB by CCDS ID:27690.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 27690.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000072776.4 ENSMUSP00000072555.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000072776.4Link to Ensembl Protein Viewer:ENSMUSP00000072555.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000072776Re-query CCDS DB by Protein ID:ENSMUSP00000072555
Original member Current member NCBI NM_010005.3 NP_034135.2 Accepted alive Link to Nucleotide Sequence:NM_010005.3Link to Protein Sequence:NP_034135.2Re-query CCDS DB by Nucleotide ID:NM_010005Re-query CCDS DB by Protein ID:NP_034135Link to BLAST:NP_034135.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_034135.2 504 P24456 504 100% 0 0

Chromosomal Locations for CCDS 27690.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 82402906 82403096 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82403197 82403338 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82403719 82403906 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82404103 82404244 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82404428 82404604 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82405235 82405395 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82405486 82405638 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82405907 82406078 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82406934 82407122 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1515 nt):
ATGGAGCTGCTGACTGGGGCTGGCCTGTGGTCTGTGGCCATATTCACCGTTATCTTCATATTACTGGTGG
ACCTGATGCACCGGCACCAGCGCTGGACTTCTCGCTACCCACCGGGCCCTGTGCCATGGCCTGTGCTGGG
TAACCTGCTGCAGGTGGACCTGGATAACATGCCATACAGCTTGTACAAGCTTCAAAACCGCTATGGTGAC
GTGTTCAGCCTGCAGATGGGCTGGAAGCCTATGGTTGTGATCAATGGACTGAAGGCAATGAAGGAAGTGC
TGTTGACCTGTGGAGAGGACACTGCTGACCGCCCTCAAGTGCCCATCTTTGAGTACCTGGGTGTGAAGCC
TGGATCCCAAGGTGTGGTCCTTGCACCCTACGGGCCCGAGTGGCGAGAGCAGAGGCGATTCTCTGTGTCT
ACCCTGCGCAACTTTGGCCTGGGCAAGAAATCACTGGAGGACTGGGTGACCAAGGAGGCCAGACACCTCT
GTGATGCCTTCACCGCCCAGGCTGGGCAGCCCATCAATCCCAACACCATGCTGAACAACGCTGTGTGCAA
TGTGATTGCATCTCTCATTTTTGCCCGTCGCTTTGAATATGAAGACCCTTACCTCATCAGGATGCAGAAA
GTACTGGAAGATAGTTTGACAGAAATCTCTGGCTTAATTCCTGAGGTTCTTAATATGTTCCCCATACTCC
TGCGCATCCCAGGACTGCCTGGGAAGGTCTTCCAAGGTCAGAAGTCCTTACTGGCCATAGTGGAGAATCT
GTTGACTGAGAATAGGAACACCTGGGACCCTGACCAGCCACCCCGAAATTTGACTGATGCCTTCCTGGCA
GAGATAGAGAAGGTAAAGGGGAATGCTGAGAGCAGCTTCAATGATGAGAACCTGCGCATGGTTGTGCTAG
ACCTGTTCACTGCAGGGATGGTGACCACCTCAACCACACTGTCCTGGGCCCTGCTGCTCATGATCCTGCA
TCCGGATGTGCAGCGCAGAGTCCAACAGGAAATCGATGCGGTCATAGGGCAGGTGCGGCATCCAGAGATG
GCAGACCAGGCTCGTATGCCCTACACCAATGCTGTCATTCATGAGGTACAGCGCTTTGGGGACATTGCTC
CACTGAATTTGCCACGCATCACAAGTCGTGACATTGAAGTGCAGGACTTCCTCATCCCCAAGGGGTCAAT
CCTCATCCCCAACATGTCCTCCGTGCTGAAGGATGAGACTGTCTGGGAAAAGCCCCTCCGCTTCCATCCT
GAACACTTCCTCGATGCCCAGGGCCACTTTGTGAAGCCTGAGGCCTTCATGCCATTCTCAGCAGGCCGCA
GATCATGCCTGGGTGAGCCCCTGGCCCGCATGGAGCTCTTCCTCTTCTTCACGTGCCTCCTGCAGCACTT
TAGCTTCTCAGTGCCCAATGGACAGCCCAGGCCTAGAAACCTTGGTGTCTTTCCTTTTCCGGTTGCCCCC
TACCCCTACCAGCTCTGTGCTGTGATGCGTGAGCAAGGACACTAA

Translation (504 aa):
MELLTGAGLWSVAIFTVIFILLVDLMHRHQRWTSRYPPGPVPWPVLGNLLQVDLDNMPYSLYKLQNRYGD
VFSLQMGWKPMVVINGLKAMKEVLLTCGEDTADRPQVPIFEYLGVKPGSQGVVLAPYGPEWREQRRFSVS
TLRNFGLGKKSLEDWVTKEARHLCDAFTAQAGQPINPNTMLNNAVCNVIASLIFARRFEYEDPYLIRMQK
VLEDSLTEISGLIPEVLNMFPILLRIPGLPGKVFQGQKSLLAIVENLLTENRNTWDPDQPPRNLTDAFLA
EIEKVKGNAESSFNDENLRMVVLDLFTAGMVTTSTTLSWALLLMILHPDVQRRVQQEIDAVIGQVRHPEM
ADQARMPYTNAVIHEVQRFGDIAPLNLPRITSRDIEVQDFLIPKGSILIPNMSSVLKDETVWEKPLRFHP
EHFLDAQGHFVKPEAFMPFSAGRRSCLGEPLARMELFLFFTCLLQHFSFSVPNGQPRPRNLGVFPFPVAP
YPYQLCAVMREQGH


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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