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Report for CCDS10422.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10422.1 Public Homo sapiens 16 METRN 24 110 108 CCDS HistoryNCBI Gene:79006Re-query CCDS DB by CCDS ID:10422.1Re-query CCDS DB by GeneID:79006See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10422.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000568223.7 ENSP00000455068.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000568223.7Link to Ensembl Protein Viewer:ENSP00000455068.1Re-query CCDS DB by Nucleotide ID:ENST00000568223Re-query CCDS DB by Protein ID:ENSP00000455068
Original member Current member NCBI NM_024042.4 NP_076947.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024042.4Link to Protein Sequence:NP_076947.1Re-query CCDS DB by Nucleotide ID:NM_024042Re-query CCDS DB by Protein ID:NP_076947Link to BLAST:NP_076947.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_076947.1 293 Q9UJH8 293 100% 0 0

Chromosomal Locations for CCDS 10422.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 715290 715393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 715584 715984 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 716933 716992 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 717071 717387 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (882 nt):
ATGGGGTTCCCGGCCGCGGCGCTGCTCTGCGCGCTGTGCTGCGGCCTCCTGGCCCCGGCTGCCCGCGCCG
GC
TACTCCGAGGAGCGCTGCAGCTGGAGGGGCAGCGGCCTCACCCAGGAGCCCGGCAGCGTGGGGCAGCT
G
GCCCTGGCCTGTGCGGAGGGCGCGGTTGAGTGGCTGTACCCGGCTGGGGCGCTGCGCCTGACCCTGGGC
GGC
CCCGATCCCAGAGCGCGGCCCGGCATCGCCTGTCTGCGGCCGGTGCGGCCCTTCGCGGGCGCCCAGG
TC
TTCGCGGAGCGCGCAGGGGGCGCCCTGGAGCTGCTGCTGGCCGAGGGCCCGGGCCCGGCAGGGGGCCG
C
TGCGTGCGCTGGGGTCCCCGCGAGCGCCGGGCCCTCTTCCTGCAGGCCACGCCGCACCAGGACATCAGC
CGC
CGCGTGGCCGCCTTCCGCTTTGAGCTGCGCGAGGACGGGCGCCCCGAGCTGCCCCCGCAGGCCCACG
GT
CTCGGCGTAGACGGTGCCTGCAGGCCCTGCAGCGACGCTGAGCTGCTCCTGGCCGCATGCACCAGCGA
C
TTCGTAATTCACGGGATCATCCATGGGGTCACCCATGACGTGGAGCTGCAGGAGTCTGTCATCACTGTG
GTG
GCCGCCCGTGTCCTCCGCCAGACACCGCCGCTGTTCCAGGCGGGGCGATCCGGGGACCAGGGGCTGA
CC
TCCATTCGTACCCCACTGCGCTGTGGCGTCCACCCGGGCCCAGGCACCTTCCTCTTCATGGGCTGGAG
C
CGCTTTGGGGAGGCCCGGCTGGGCTGTGCCCCACGATTCCAGGAGTTCCGCCGTGCCTACGAGGCTGCC
CGT
GCTGCCCACCTCCACCCCTGCGAGGTGGCGCTGCACTGA


Translation (293 aa):
MGFPAAALLCALCCGLLAPAARAGYSEERCSWRGSGLTQEPGSVGQLALACAEGAVEWLYPAGALRLTLG
G
PDPRARPGIACLRPVRPFAGAQVFAERAGGALELLLAEGPGPAGGRCVRWGPRERRALFLQATPHQDIS
R
RVAAFRFELREDGRPELPPQAHGLGVD
GACRPCSDAELLLAACTSDFVIHGIIHGVTHDVELQESVITV
V
AARVLRQTPPLFQAGRSGDQGLTSIRTPLRCGVHPGPGTFLFMGWSRFGEARLGCAPRFQEFRRAYEAA
R
AAHLHPCEVALH




Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser