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Report for CCDS75520.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75520.1 Public Homo sapiens 6 TAAR9 24 110 108 CCDS HistoryNCBI Gene:134860Re-query CCDS DB by CCDS ID:75520.1See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)


Attributes
Polymorphic pseudogene

Sequence IDs included in CCDS 75520.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000434551.3 ENSP00000424607.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000434551.3Link to Ensembl Protein Viewer:ENSP00000424607.2Re-query CCDS DB by Nucleotide ID:ENST00000434551Re-query CCDS DB by Protein ID:ENSP00000424607
Original member Current member NCBI NM_175057.4 NP_778227.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_175057.4Link to Protein Sequence:NP_778227.3Re-query CCDS DB by Nucleotide ID:NM_175057Re-query CCDS DB by Protein ID:NP_778227Link to BLAST:NP_778227.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_778227.3 348 Q96RI9 348 100% 0 0

Chromosomal Locations for CCDS 75520.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 132538290 132539336 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1047 nt):
ATGGTGAACAATTTCTCCCAAGCTGAGGCTGTGGAGCTGTGTTACAAGAACGTGAACGAATCCTGCATTA
AAACTCCTTACTCGCCAGGTCCTCGATCTATCCTCTACGCCGTCCTTGGTTTTGGGGCTGTGCTGGCAGC
GTTTGGAAACTTACTGGTCATGATTGCTATCCTTCACTTCAAACAACTGCACACACCTACAAACTTTCTG
ATTGCGTCGCTGGCCTGTGCTGACTTCTTGGTGGGAGTCACTGTGATGCCCTTCAGCACAGTGAGGTCTG
TGGAGAGCTGTTGGTACTTTGGGGACAGTTACTGTAAATTCCATACATGTTTTGACACATCCTTCTGTTT
TGCTTCTTTATTTCATTTATGCTGTATCTCTGTTGATAGATACATTGCTGTTACTGATCCTCTGACCTAT
CCAACCAAGTTTACTGTGTCAGTTTCAGGGATATGCATTGTTCTTTCCTGGTTCTTTTCTGTCACATACA
GCTTTTCGATCTTTTACACGGGAGCCAACGAAGAAGGAATTGAGGAATTAGTAGTTGCTCTAACCTGTGT
AGGAGGCTGCCAGGCTCCACTGAATCAAAACTGGGTCCTACTTTGTTTTCTTCTATTCTTTATACCCAAT
GTCGCCATGGTGTTTATATACAGTAAGATATTTTTGGTGGCCAAGCATCAGGCTAGGAAGATAGAAAGTA
CAGCCAGCCAAGCTCAGTCCTCCTCAGAGAGTTACAAGGAAAGAGTAGCAAAAAGAGAGAGAAAGGCTGC
CAAAACCTTGGGAATTGCTATGGCAGCATTTCTTGTCTCTTGGCTACCATACCTCGTTGATGCAGTGATT
GATGCTTATATGAATTTTATAACTCCTCCTTATGTTTATGAGATTTTAGTTTGGTGTGTTTATTATAATT
CAGCTATGAACCCCTTGATTTATGCTTTCTTTTACCAATGGTTTGGGAAGGCAATAAAACTTATTGTAAG
CGGCAAGGTCTTAAGGACTGATTCGTCAACAACTAATTTATTTTCTGAAGAAGTAGAGACAGATTAA

Translation (348 aa):
MVNNFSQAEAVELCYKNVNESCIKTPYSPGPRSILYAVLGFGAVLAAFGNLLVMIAILHFKQLHTPTNFL
IASLACADFLVGVTVMPFSTVRSVESCWYFGDSYCKFHTCFDTSFCFASLFHLCCISVDRYIAVTDPLTY
PTKFTVSVSGICIVLSWFFSVTYSFSIFYTGANEEGIEELVVALTCVGGCQAPLNQNWVLLCFLLFFIPN
VAMVFIYSKIFLVAKHQARKIESTASQAQSSSESYKERVAKRERKAAKTLGIAMAAFLVSWLPYLVDAVI
DAYMNFITPPYVYEILVWCVYYNSAMNPLIYAFFYQWFGKAIKLIVSGKVLRTDSSTTNLFSEEVETD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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