NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS24930.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24930.1 Public Mus musculus 11 Dvl2 23 108 98 CCDS HistoryNCBI Gene:13543Re-query CCDS DB by CCDS ID:24930.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 24930.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000019362.14 ENSMUSP00000019362.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000019362.14Link to Ensembl Protein Viewer:ENSMUSP00000019362.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000019362Re-query CCDS DB by Protein ID:ENSMUSP00000019362
Original member Current member EBI ENSMUST00000102575.8 ENSMUSP00000099635.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000102575.8Link to Ensembl Protein Viewer:ENSMUSP00000099635.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000102575Re-query CCDS DB by Protein ID:ENSMUSP00000099635
Original member Current member EBI ENSMUST00000190940.1 ENSMUSP00000140073.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000190940.1Link to Ensembl Protein Viewer:ENSMUSP00000140073.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000190940Re-query CCDS DB by Protein ID:ENSMUSP00000140073
Original member Current member NCBI NM_007888.4 NP_031914.3 Accepted alive Link to Nucleotide Sequence:NM_007888.4Link to Protein Sequence:NP_031914.3Re-query CCDS DB by Nucleotide ID:NM_007888Re-query CCDS DB by Protein ID:NP_031914Link to BLAST:NP_031914.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_031914.3 736 Q60838 736 100% 0 0

Chromosomal Locations for CCDS 24930.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 70000833 70001026 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70004805 70004874 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70005155 70005300 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70005437 70005546 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70005662 70005797 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70005938 70006028 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70006136 70006205 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70006291 70006430 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70006514 70006590 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70007453 70007520 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70007815 70007943 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70008020 70008151 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70008281 70008460 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70008777 70008995 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70009144 70009592 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2211 nt):
ATGGCGGGCAGCAGCGCGGGGGGCGGTGGTGTAGGCGAGACGAAGGTGATTTACCATCTGGATGAAGAAG
AGACTCCTTACCTGGTGAAGATCCCTGTCCCGGCGGAGCGCATCACGCTCGGCGATTTCAAGAGCGTTTT
GCAGCGGCCCGCGGGCGCCAAGTACTTTTTCAAGTCCATGGATCAGGATTTTGGGGTGGTGAAGGAAGAG
ATCTCCGATGACAATGCCCGCCTACCTTGCTTCAATGGAAGGGTTGTCTCCTGGCTTGTGTCGTCAGATA
CCCCACAGCCTGAGGTGGCTCCCCCAGCCCATGAGTCTCGGACAGAACTGGTTCCTCCGCCTCCACCCTT
ACCCCCTTTGCCACCAGAAAGGACCAGTGGAATTGGGGACTCAAGGCCTCCATCCTTCCACCCTAATGTA
TCCAGCAGCCATGAAAATCTAGAGCCTGAGACAGAGACCGAATCTGTCGTATCACTGAGGCGAGACCGAC
CTAGGAGGAGAGACAGCAGTGAACATGGCGCTGGTGGCCACAGGCCTGGTGGCCCCTCGAGGCTGGAGCG
CCACCTGGCTGGCTACGAGAGCTCTTCCACCCTCATGACCAGTGAGCTGGAGAGTACCAGCCTAGGAGAC
TCGGATGAGGATGACACCATGAGTAGGTTCAGCAGCTCCACTGAGCAGAGCAGTGCCTCCCGCCTCCTCA
AGCGCCACCGAAGGCGAAGGAAGCAGCGGCCGCCACGCATGGAGAGGACCTCATCCTTCAGCAGTGTCAC
CGATTCCACAATGTCTCTCAACATCATCACGGTCACGCTCAACATGGAGAAGTACAACTTCCTGGGCATC
TCCATTGTGGGCCAAAGTAACGAGCGTGGTGATGGGGGCATCTACATCGGCTCCATCATGAAAGGGGGCG
CGGTGGCTGCGGACGGGCGGATCGAGCCTGGAGACATGCTTTTGCAGGTAAATGATATGAACTTTGAGAA
CATGAGCAACGACGATGCTGTACGAGTGCTGAGAGACATCGTGCACAAGCCAGGCCCCATCGTGCTGACC
GTGGCCAAGTGTTGGGACCCGTCTCCCCAGGCCTACTTCACCCTCCCTCGAAATGAGCCCATCCAGCCCA
TCGACCCAGCCGCCTGGGTGTCGCACTCGGCTGCGCTGACTGGCGCCTTCCCTGCTTACCCTGGCTCCTC
ATCTATGAGCACTATCACATCTGGCTCCTCTCTGCCTGATGGCTGCGAAGGCCGGGGTCTCTCTGTCCAC
ATGGACATGGCCTCTGTCACCAAGGCCATGGCAGCCCCAGAGTCTGGGCTCGAAGTCCGGGACCGCATGT
GGCTCAAGATCACCATCCCAAACGCCTTTCTAGGCTCCGATGTGGTGGACTGGCTGTACCATCACGTGGA
AGGTTTTCCTGAGCGCCGGGAGGCCCGCAAGTATGCCAGTGGGCTGTTGAAGGCGGGACTCATCCGGCAC
ACCGTCAACAAGATTACTTTCTCTGAGCAGTGCTATTATGTCTTCGGGGACCTCAGTGGTGGCTGTGAGA
GTTACCTAGTTAACCTCTCTCTGAATGACAATGACGGTTCCAGTGGGGCTTCAGACCAGGATACCCTGGC
ACCTCTGCCTGGAGCTACTCCCTGGCCCCTGCTGCCCACCTTCTCCTACCAGTATCCAGCGCCACACCCC
TACAGCCCCCAGCCTCCACCCTACCACGAGCTTTCTTCGTACACCTATGGTGGAGGCAGTGCCAGCAGCC
AGCACAGTGAGGGGAGCCGGAGCAGCGGGTCGACAAGAAGCGATGGGGGGGCTGGGCGCACAGGCAGGCC
TGAGGAACGGGCCCCTGAGTCCAAGTCCGGCAGTGGCAGTGAGTCAGAACTCTCCAGCCGGGGAGGCAGC
CTTCGGCGGGGTGGGGAGCCTGGTGGGACTGGTGATGGCGGCCCTCCTCCATCCAGGGGCTCGACAGGCG
CTCCTCCTAATCTCCGAGCTCTTCCCGGGCTCCATCCCTATGGAGCCCCATCTGGCATGGCTCTCCCCTA
TAACCCCATGATGGTAGTTATGATGCCTCCACCCCCACCCCCTGTCTCCACAGCAGTGCAGCCCCCTGGT
GCCCCTCCAGTCAGAGACCTGGGCTCCGTGCCCCCAGAACTGACAGCTAGCCGTCAGAGCTTCCACATGG
CCATGGGCAACCCCAGTGAGTTTTTTGTGGATGTTATGTAG

Translation (736 aa):
MAGSSAGGGGVGETKVIYHLDEEETPYLVKIPVPAERITLGDFKSVLQRPAGAKYFFKSMDQDFGVVKEE
ISDDNARLPCFNGRVVSWLVSSDTPQPEVAPPAHESRTELVPPPPPLPPLPPERTSGIGDSRPPSFHPNV
SSSHENLEPETETESVVSLRRDRPRRRDSSEHGAGGHRPGGPSRLERHLAGYESSSTLMTSELESTSLGD
SDEDDTMSRFSSSTEQSSASRLLKRHRRRRKQRPPRMERTSSFSSVTDSTMSLNIITVTLNMEKYNFLGI
SIVGQSNERGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMSNDDAVRVLRDIVHKPGPIVLT
VAKCWDPSPQAYFTLPRNEPIQPIDPAAWVSHSAALTGAFPAYPGSSSMSTITSGSSLPDGCEGRGLSVH
MDMASVTKAMAAPESGLEVRDRMWLKITIPNAFLGSDVVDWLYHHVEGFPERREARKYASGLLKAGLIRH
TVNKITFSEQCYYVFGDLSGGCESYLVNLSLNDNDGSSGASDQDTLAPLPGATPWPLLPTFSYQYPAPHP
YSPQPPPYHELSSYTYGGGSASSQHSEGSRSSGSTRSDGGAGRTGRPEERAPESKSGSGSESELSSRGGS
LRRGGEPGGTGDGGPPPSRGSTGAPPNLRALPGLHPYGAPSGMALPYNPMMVVMMPPPPPPVSTAVQPPG
APPVRDLGSVPPELTASRQSFHMAMGNPSEFFVDVM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH