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Report for CCDS10004.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10004.1 Public Homo sapiens 14 CRIP1 24 110 108 CCDS HistoryNCBI Gene:1396Re-query CCDS DB by CCDS ID:10004.1See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10004.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000330233.11 ENSP00000332449.7 Accepted alive Link to Ensembl Transcript Viewer:ENST00000330233.11Link to Ensembl Protein Viewer:ENSP00000332449.7Re-query CCDS DB by Nucleotide ID:ENST00000330233Re-query CCDS DB by Protein ID:ENSP00000332449
Original member Current member EBI ENST00000392531.4 ENSP00000376315.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000392531.4Link to Ensembl Protein Viewer:ENSP00000376315.3Re-query CCDS DB by Nucleotide ID:ENST00000392531Re-query CCDS DB by Protein ID:ENSP00000376315
Original member Current member EBI ENST00000409393.6 ENSP00000386340.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000409393.6Link to Ensembl Protein Viewer:ENSP00000386340.2Re-query CCDS DB by Nucleotide ID:ENST00000409393Re-query CCDS DB by Protein ID:ENSP00000386340
Original member Current member EBI ENST00000477724.6 ENSP00000455329.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000477724.6Link to Ensembl Protein Viewer:ENSP00000455329.1Re-query CCDS DB by Nucleotide ID:ENST00000477724Re-query CCDS DB by Protein ID:ENSP00000455329
Original member Current member NCBI NM_001311.5 NP_001302.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001311.5Link to Protein Sequence:NP_001302.1Re-query CCDS DB by Nucleotide ID:NM_001311Re-query CCDS DB by Protein ID:NP_001302Link to BLAST:NP_001302.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001302.1 77 P50238 77 100% 0 0

Chromosomal Locations for CCDS 10004.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 105487260 105487299 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 105488166 105488260 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 105488331 105488388 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 105488471 105488511 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (234 nt):
ATGCCCAAGTGTCCCAAGTGCAACAAGGAGGTGTACTTCGCCGAGAGGGTGACCTCTCTGGGCAAGGACT
GGCATCGGCCCTGCCTGAAGTGCGAGAAATGTGGGAAGACGCTGACCTCTGGGGGCCACGCTGAGCACGA
AGGCAAACCCTACTGCAACCACCCCTGCTACGCAGCCATGTTTGGGCCTAAAGGCTTTGGGCGGGGCGGA
GCCGAGAGCCACACTTTCAAGTAA

Translation (77 aa):
MPKCPKCNKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPCYAAMFGPKGFGRGG
AESHTFK


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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