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Report for CCDS8419.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8419.1 Public Homo sapiens 11 RNF26 24 110 108 CCDS HistoryNCBI Gene:79102Re-query CCDS DB by CCDS ID:8419.1Re-query CCDS DB by GeneID:79102See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8419.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000311413.5 ENSP00000312439.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000311413.5Link to Ensembl Protein Viewer:ENSP00000312439.4Re-query CCDS DB by Nucleotide ID:ENST00000311413Re-query CCDS DB by Protein ID:ENSP00000312439
Original member Current member NCBI NM_032015.5 NP_114404.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032015.5Link to Protein Sequence:NP_114404.1Re-query CCDS DB by Nucleotide ID:NM_032015Re-query CCDS DB by Protein ID:NP_114404Link to BLAST:NP_114404.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_114404.1 433 Q9BY78 433 100% 0 0

Chromosomal Locations for CCDS 8419.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 119335123 119336424 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1302 nt):
ATGGAGGCAGTGTACCTGGTAGTGAATGGGTTGGGCCTGGTGCTGGACGTGCTGACCTTGGTGTTGGACC
TC
AACTTCCTGCTGGTGTCCTCCCTCCTGGCTTCCCTGGCCTGGCTCCTGGCCTTCGTCTACAACCTGCC
G
CACACGGTACTGACTAGTCTTCTGCACTTGGGCCGCGGAGTCTTGCTTTCATTGCTGGCCTTGATCGAA
GCC
GTGGTCCGGTTCACATGTGGGGGCTTGCAGGCCTTGTGTACTCTGCTGTATAGCTGCTGCTCTGGCC
TA
GAGAGCCTAAAGCTCCTGGGGCACCTGGCCTCTCATGGGGCACTGCGGAGCAGGGAGATACTGCACCG
G
GGCGTCCTCAATGTGGTCTCCAGTGGCCATGCTTTGCTGCGCCAGGCCTGTGACATCTGTGCCATTGCC
ATG
AGCCTGGTGGCTTATGTGATCAACAGCCTGGTCAACATCTGCCTCATCGGCACTCAGAACCTCTTTT
CC
CTGGTGCTGGCCCTGTGGGATGCAGTGACCGGGCCTCTGTGGAGGATGACGGACGTAGTGGCTGCCTT
C
CTAGCCCACATTTCCAGCAGTGCTGTGGCCATGGCCATCCTCCTTTGGACACCCTGCCAACTAGCCCTG
GAG
CTGCTGGCCTCAGCTGCCCGCCTCCTGGCCAGCTTTGTGCTTGTCAATCTCACTGGCTTGGTGTTGC
TA
GCTTGTGTGCTGGCAGTGACGGTGACTGTGTTGCATCCGGACTTCACCCTGAGGCTGGCTACCCAGGC
A
CTCAGCCAGCTCCATGCCCGGCCATCCTACCACCGTCTTCGAGAGGATGTCATGCGGCTCTCTCGCCTA
GCA
CTGGGCTCAGAGGCCTGGCGCCGAGTCTGGAGCCGCAGTCTGCAGCTGGCGAGTTGGCCAAACCGGG
GA
GGGGCACCTGGAGCTCCCCAGGGTGACCCTATGAGGGTATTCTCAGTTAGGACCCGGAGACAGGACAC
T
CTTCCTGAAGCGGGGCGCAGATCAGAGGCAGAAGAGGAGGAGGCCAGGACCATCAGAGTGACACCTGTC
AGG
GGCCGAGAGAGGCTCAATGAGGAGGAGCCTCCAGGTGGGCAAGACCCTTGGAAATTGCTGAAGGAGC
AA
GAGGAGCGGAAGAAGTGTGTCATCTGCCAGGACCAGAGCAAGACAGTGTTGCTCCTGCCCTGCCGGCA
T
CTGTGCCTGTGCCAGGCCTGCACTGAAATCCTGATGCGCCACCCCGTCTACCACCGCAATTGCCCGCTC
TGC
CGCCGGGGCATCCTGCAGACCCTCAATGTCTACCTCTGA


Translation (433 aa):
MEAVYLVVNGLGLVLDVLTLVLDLNFLLVSSLLASLAWLLAFVYNLPHTVLTSLLHLGRGVLLSLLALIE
A
VVRFTCGGLQALCTLLYSCCSGLESLKLLGHLASHGALRSREILHRGVLNVVSSGHALLRQACDICAIA
M
SLVAYVINSLVNICLIGTQNLFSLVLALWDAVTGPLWRMTDVVAAFLAHISSSAVAMAILLWTPCQLAL
E
LLASAARLLASFVLVNLTGLVLLACVLAVTVTVLHPDFTLRLATQALSQLHARPSYHRLREDVMRLSRL
A
LGSEAWRRVWSRSLQLASWPNRGGAPGAPQGDPMRVFSVRTRRQDTLPEAGRRSEAEEEEARTIRVTPV
R
GRERLNEEEPPGGQDPWKLLKEQEERKKCVICQDQSKTVLLLPCRHLCLCQACTEILMRHPVYHRNCPL
C
RRGILQTLNVYL




Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser