NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS17813.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
17813.1 Public Mus musculus 3 Fabp2 23 108 98 CCDS HistoryNCBI Gene:14079Re-query CCDS DB by CCDS ID:17813.1See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 17813.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000023820.5 ENSMUSP00000023820.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000023820.5Link to Ensembl Protein Viewer:ENSMUSP00000023820.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000023820Re-query CCDS DB by Protein ID:ENSMUSP00000023820
Original member Current member NCBI NM_007980.3 NP_032006.1 Accepted alive Link to Nucleotide Sequence:NM_007980.3Link to Protein Sequence:NP_032006.1Re-query CCDS DB by Nucleotide ID:NM_007980Re-query CCDS DB by Protein ID:NP_032006Link to BLAST:NP_032006.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032006.1 132 P55050 132 100% 0 0

Chromosomal Locations for CCDS 17813.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 3 (NC_000069.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 122895413 122895479 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 122896737 122896909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 122898701 122898808 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 122899231 122899281 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (399 nt):
ATGGCATTCGACGGCACGTGGAAAGTAGACCGGAACGAGAACTATGAAAAGTTCATGGAGAAAATGGGCA
TTAATGTGATGAAGAGGAAGCTTGGAGCTCATGACAATCTGAAACTGACAATCACACAGGATGGAAATAA
ATTCACAGTCAAAGAATCAAGCAACTTCAGAAACATTGATGTTGTGTTTGAGCTCGGTGTAAACTTTCCC
TACAGTCTAGCAGACGGAACGGAGCTCACTGGGGCCTGGACCATTGAGGGAAATAAACTTATTGGGAAAT
TCACACGTGTAGACAATGGAAAGGAGCTGATTGCTGTCCGAGAGGTTTCTGGTAATGAACTAATCCAGAC
CTACACATATGAAGGAGTTGAGGCCAAGCGATTCTTTAAGAAGGAATAA

Translation (132 aa):
MAFDGTWKVDRNENYEKFMEKMGINVMKRKLGAHDNLKLTITQDGNKFTVKESSNFRNIDVVFELGVNFP
YSLADGTELTGAWTIEGNKLIGKFTRVDNGKELIAVREVSGNELIQTYTYEGVEAKRFFKKE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH