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Report for CCDS21185.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21185.1 Public Mus musculus 7 Klk5 23 108 98 CCDS HistoryNCBI Gene:68668Re-query CCDS DB by CCDS ID:21185.1Re-query CCDS DB by GeneID:68668See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 21185.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000048444.6 ENSMUSP00000049339.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000048444.6Link to Ensembl Protein Viewer:ENSMUSP00000049339.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000048444Re-query CCDS DB by Protein ID:ENSMUSP00000049339
Original member Current member NCBI NM_026806.2 NP_081082.1 Accepted alive Link to Nucleotide Sequence:NM_026806.2Link to Protein Sequence:NP_081082.1Re-query CCDS DB by Nucleotide ID:NM_026806Re-query CCDS DB by Protein ID:NP_081082Link to BLAST:NP_081082.1

Chromosomal Locations for CCDS 21185.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 43842316 43842388 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43845168 43845432 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43846984 43847240 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43847441 43847574 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43850719 43850871 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (882 nt):
ATGGCGAGGACCGGACACCCCTGGAAATGGGCAATGGCTACCCTGATCACAACCCTGGTTCTGGGGGTCT
CAGAGCCTGTTCTTGCTGGGGATGTTTCCTCTTGTGACAACCCCTCTGGAACCGAACCCTCTGGGACCAA
CAGAGACCTCAGCACGGATTCCAAGTCTGGGGAGGACACCCGTTCAGATAGCAGCTCTCGAATTGTGAAT
GGGTCAGACTGCCAAAAGGATGCACAGCCATGGCAGGGCGCCCTGCTTCTGGGGCCCAACAAGCTGTACT
GTGGGGCTGTGCTGATCAGCCCACAGTGGCTGCTCACAGCAGCACACTGCAGAAAGCCAGTGTTCAGAAT
CCGTCTGGGCCACCATTCCATGTCACCTGTCTATGAGTCTGGGCAGCAGATGTTCCAGGGAATCAAATCC
ATCCCCCACCCCGGTTACTCCCACCCTGGCCACTCCAATGACCTCATGCTCATCAAAATGAACAGAAAAA
TCCGTGACTCTCACTCAGTGAAGCCCGTCGAAATTGCTTGTGACTGTGCCACCGAGGGGACTAGGTGCAT
GGTGTCTGGCTGGGGGACAACGAGCAGCAGCCACAATAACTTCCCGAAAGTCCTCCAGTGCCTGAATATT
ACTGTGCTCAGTGAGGAGAGGTGTAAAAACTCCTACCCAGGACAGATAGACAAGACCATGTTCTGCGCAG
GTGATGAAGAGGGCAGGGACTCCTGCCAGGGTGATTCCGGAGGTCCTGTGGTCTGCAATGGCAAGTTACA
GGGCCTTGTGTCCTGGGGTGATTTCCCCTGTGCTCAGCGGAACAGACCAGGTGTCTACACCAACCTGTGT
GAGTTCGTTAAGTGGATTAAAGACACCATGAACTCCAACTAA

Translation (293 aa):
MARTGHPWKWAMATLITTLVLGVSEPVLAGDVSSCDNPSGTEPSGTNRDLSTDSKSGEDTRSDSSSRIVN
GSDCQKDAQPWQGALLLGPNKLYCGAVLISPQWLLTAAHCRKPVFRIRLGHHSMSPVYESGQQMFQGIKS
IPHPGYSHPGHSNDLMLIKMNRKIRDSHSVKPVEIACDCATEGTRCMVSGWGTTSSSHNNFPKVLQCLNI
TVLSEERCKNSYPGQIDKTMFCAGDEEGRDSCQGDSGGPVVCNGKLQGLVSWGDFPCAQRNRPGVYTNLC
EFVKWIKDTMNSN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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