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Report for CCDS7591.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7591.1 Public Homo sapiens 10 TRUB1 24 110 108 CCDS HistoryNCBI Gene:142940Re-query CCDS DB by CCDS ID:7591.1See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7591.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000298746.5 ENSP00000298746.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000298746.5Link to Ensembl Protein Viewer:ENSP00000298746.3Re-query CCDS DB by Nucleotide ID:ENST00000298746Re-query CCDS DB by Protein ID:ENSP00000298746
Original member Current member NCBI NM_139169.5 NP_631908.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_139169.5Link to Protein Sequence:NP_631908.1Re-query CCDS DB by Nucleotide ID:NM_139169Re-query CCDS DB by Protein ID:NP_631908Link to BLAST:NP_631908.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_631908.1 349 Q8WWH5 349 100% 0 0

Chromosomal Locations for CCDS 7591.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 114938254 114938539 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114942645 114942743 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114951094 114951149 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114959726 114959807 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114970368 114970440 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114972135 114972274 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114974329 114974385 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114975123 114975379 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1050 nt):
ATGGCCGCTTCTGAGGCGGCGGTGGTGTCTTCGCCGTCTTTGAAAACAGACACATCCCCTGTCCTTGAAA
CTGCAGGAACGGTCGCAGCAATGGCTGCGACCCCGTCAGCAAGGGCTGCAGCCGCGGTGGTTGCGGCCGC
GGCCAGGACCGGATCCGAAGCCAGGGTCTCCAAGGCCGCTTTGGCTACCAAGCTGCTGTCCTTGAGCGGC
GTGTTCGCCGTGCACAAGCCCAAAGGGCCCACTTCAGCCGAGCTGCTGAATCGGTTGAAGGAGAAGCTGC
TGGCAGAAGCTGGAATGCCTTCTCCAGAATGGACCAAGAGGAAAAAGCAGACTTTGAAAATTGGGCATGG
AGGGACTCTAGACAGCGCAGCCCGAGGAGTTCTGGTTGTTGGAATTGGAAGCGGAACAAAAATGTTGACC
AGTATGTTGTCAGGGTCCAAGAGATATACTGCCATTGGAGAACTGGGGAAAGCTACTGATACACTAGATT
CTACGGGGAGGGTAACAGAAGAAAAACCTTACGATAAAATAACACAAGAAGATATTGAAGGCATTCTACA
GAAATTTACTGGAAATATAATGCAAGTGCCCCCCCTCTATTCTGCATTAAAGAAAGATGGACAAAGACTT
TCGACTTTGATGAAGAGAGGTGAAGTCGTAGAAGCAAAACCTGCCAGGCCAGTGACTGTATACAGTATCT
CCCTTCAAAAATTCCAGCCACCATTTTTCACATTAGATGTTGAATGTGGAGGAGGTTTTTATATCAGAAG
CTTGGTCAGTGACATTGGAAAAGAACTATCTTCCTGTGCCAATGTGCTAGAGCTGACCCGAACCAAACAG
GGACCATTTACGCTAGAAGAACATGCCCTTCCTGAAGACAAATGGACAATTGATGACATTGCACAGTCTC
TTGAGCATTGCTCATCTCTTTTCCCAGCAGAGTTGGCACTTAAAAAATCAAAACCTGAGTCTAATGAACA
GGTTTTGAGCTGTGAATATATAACTCTAAATGAGCCAAAGAGAGAAGATGATGTAATTAAGACGTGTTGA

Translation (349 aa):
MAASEAAVVSSPSLKTDTSPVLETAGTVAAMAATPSARAAAAVVAAAARTGSEARVSKAALATKLLSLSG
VFAVHKPKGPTSAELLNRLKEKLLAEAGMPSPEWTKRKKQTLKIGHGGTLDSAARGVLVVGIGSGTKMLT
SMLSGSKRYTAIGELGKATDTLDSTGRVTEEKPYDKITQEDIEGILQKFTGNIMQVPPLYSALKKDGQRL
STLMKRGEVVEAKPARPVTVYSISLQKFQPPFFTLDVECGGGFYIRSLVSDIGKELSSCANVLELTRTKQ
GPFTLEEHALPEDKWTIDDIAQSLEHCSSLFPAELALKKSKPESNEQVLSCEYITLNEPKREDDVIKTC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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