NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS10505.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10505.1 Public Homo sapiens 16 ZNF597 24 110 108 CCDS HistoryNCBI Gene:146434Re-query CCDS DB by CCDS ID:10505.1See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10505.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000301744.7 ENSP00000301744.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000301744.7Link to Ensembl Protein Viewer:ENSP00000301744.4Re-query CCDS DB by Nucleotide ID:ENST00000301744Re-query CCDS DB by Protein ID:ENSP00000301744
Original member Current member NCBI NM_152457.3 NP_689670.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152457.3Link to Protein Sequence:NP_689670.1Re-query CCDS DB by Nucleotide ID:NM_152457Re-query CCDS DB by Protein ID:NP_689670Link to BLAST:NP_689670.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689670.1 424 Q96LX8 424 100% 0 0

Chromosomal Locations for CCDS 10505.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 3436424 3437538 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 3440807 3440933 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 3443121 3443153 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1275 nt):
ATGGCGTCCATGCCCCCGACGCCCGAGGCCCAGGGACCAATACTCTTTGAGGATCTGGCTGTGTATTTTT
CTCAAGAGGAGTGCGTGACTCTGCACCCTGCCCAGAGGTCCCTCAGCAAAGATGGTACAAAAGAGTCTTT
GGAGGATGCGGCTTTGATGGGAGAGGAAGGCAAGCCTGAGATTAATCAGCAGTTAAGCCTAGAGTCTATG
GAACTTGACGAGCTTGCCTTAGAAAAGTACCCCATTGCTGCACCCCTTGTCCCTTACCCAGAAAAATCCT
CTGAGGATGGAGTTGGAAACCCTGAAGCGAAAATATTAAGTGGAACTCCCACTTACAAGAGAAGGGTCAT
CAGCCTTTTAGTTACCATTGAAAACCACACCCCATTAGTAGAACTCTCTGAATATTTAGGAACCAACACA
CTTTCTGAAATTCTTGATTCTCCCTGGGAAGGAGCCAAAAATGTGTACAAATGTCCTGAGTGTGACCAAA
ACTTCAGCGATCATTCATACCTAGTTTTGCATCAGAAAATTCATTCAGGAGAGAAAAAACATAAATGTGG
TGACTGTGGAAAGATCTTCAATCATAGAGCCAACCTGAGGACACACAGGAGAATCCATACTGGTGAGAAA
CCTTATAAGTGTGCCAAGTGCAGTGCCAGCTTTCGCCAGCACTCTCATCTATCCCGACACATGAATAGCC
ACGTAAAGGAGAAGCCCTATACATGTAGCATATGTGGTAGAGGTTTTATGTGGCTCCCAGGATTGGCACA
GCATCAGAAAAGCCACAGTGCTGAAAACACCTACGAATCTACTAACTGTGATAAACATTTTAATGAGAAA
CCAAATCTTGCTTTGCCTGAGGAAACATTCGTATCAGGCCCCCAGTACCAGCACACTAAGTGCATGAAGA
GCTTCAGGCAGTCCTTATATCCTGCCCTTTCCGAGAAGAGCCACGACGAGGACTCTGAACGCTGCAGCGA
TGATGGGGACAATTTCTTCTCATTCTCAAAATTCAAGCCCTTACAGTGTCCTGACTGTGACATGACCTTT
CCTTGTTTCTCTGAGCTTATTTCCCATCAGAACATTCATACAGAGGAAAGGCCCCATAAGTGCAAAACAT
GCGAGGAAAGTTTTGCTTTGGACTCAGAACTTGCATGCCACCAGAAGAGCCACATGCTAGCGGAACCTTT
TAAATGTACCGTGTGTGGGAAAACTTTCAAGTCGAATTTGCATCTCATTACTCATAAGCGAACTCACATA
AAAAACACCACGTAA

Translation (424 aa):
MASMPPTPEAQGPILFEDLAVYFSQEECVTLHPAQRSLSKDGTKESLEDAALMGEEGKPEINQQLSLESM
ELDELALEKYPIAAPLVPYPEKSSEDGVGNPEAKILSGTPTYKRRVISLLVTIENHTPLVELSEYLGTNT
LSEILDSPWEGAKNVYKCPECDQNFSDHSYLVLHQKIHSGEKKHKCGDCGKIFNHRANLRTHRRIHTGEK
PYKCAKCSASFRQHSHLSRHMNSHVKEKPYTCSICGRGFMWLPGLAQHQKSHSAENTYESTNCDKHFNEK
PNLALPEETFVSGPQYQHTKCMKSFRQSLYPALSEKSHDEDSERCSDDGDNFFSFSKFKPLQCPDCDMTF
PCFSELISHQNIHTEERPHKCKTCEESFALDSELACHQKSHMLAEPFKCTVCGKTFKSNLHLITHKRTHI
KNTT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH