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Report for CCDS19769.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
19769.1 Public Mus musculus 5 Gnb2 23 108 98 CCDS HistoryNCBI Gene:14693Re-query CCDS DB by CCDS ID:19769.1See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 19769.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000031726.14 ENSMUSP00000031726.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000031726.14Link to Ensembl Protein Viewer:ENSMUSP00000031726.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000031726Re-query CCDS DB by Protein ID:ENSMUSP00000031726
Original member Current member EBI ENSMUST00000150063.8 ENSMUSP00000129353.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000150063.8Link to Ensembl Protein Viewer:ENSMUSP00000129353.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000150063Re-query CCDS DB by Protein ID:ENSMUSP00000129353
Original member Current member NCBI NM_010312.5 NP_034442.1 Accepted alive Link to Nucleotide Sequence:NM_010312.5Link to Protein Sequence:NP_034442.1Re-query CCDS DB by Nucleotide ID:NM_010312Re-query CCDS DB by Protein ID:NP_034442Link to BLAST:NP_034442.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_034442.1 340 P62880 340 100% 0 0

Chromosomal Locations for CCDS 19769.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 5 (NC_000071.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 137528503 137528609 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 137528691 137528907 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 137529004 137529205 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 137529443 137529509 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 137529603 137529765 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 137529846 137529909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 137530184 137530290 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 137530398 137530436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 137530695 137530751 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1023 nt):
ATGAGTGAGCTGGAGCAACTGAGACAGGAGGCCGAGCAGCTCCGGAACCAGATCCGGGACGCCAGAAAAG
CATGCGGGGATTCCACACTGACCCAGATCACAGCTGGGCTGGACCCAGTGGGGCGAATTCAGATGAGAAC
ACGGAGGACCCTCCGTGGACACCTGGCAAAAATCTATGCCATGCACTGGGGGACAGACTCAAGGCTGCTG
GTCAGCGCCTCCCAGGACGGAAAGCTCATCATTTGGGACAGCTACACCACTAACAAGGTCCACGCCATCC
CTCTGCGTTCCTCCTGGGTCATGACCTGTGCCTACGCCCCCTCAGGGAACTTTGTGGCCTGTGGGGGTTT
GGACAACATCTGCTCCATCTATAGTCTCAAGACCCGAGAGGGCAATGTCAGGGTCAGCAGAGAGCTGCCT
GGCCACACTGGGTACCTGTCATGCTGCCGCTTCCTGGACGACAACCAAATCATCACCAGCTCTGGGGACA
CCACCTGTGCCCTGTGGGACATTGAGACAGGCCAGCAGACGGTGGGGTTTGCTGGACACAGTGGGGATGT
GATGTCCCTGTCACTGGCCCCCGATGGCCGCACCTTTGTGTCAGGTGCCTGTGACGCCTCCATCAAGCTG
TGGGATGTTCGGGATTCCATGTGCCGACAGACATTCATAGGTCACGAGTCGGACATCAATGCCGTGGCTT
TCTTCCCCAATGGCTATGCCTTCACCACGGGATCAGATGACGCCACTTGTCGCCTCTTTGACCTGCGGGC
TGATCAGGAGCTGCTCATGTATTCCCACGACAACATCATCTGCGGCATCACCTCGGTTGCCTTCTCGCGC
AGCGGCCGGCTGCTGCTCGCTGGCTACGACGACTTCAACTGCAACATCTGGGATGCCATGAAGGGTGACC
GTGCAGGTGTCCTCGCTGGCCATGATAACCGTGTGAGCTGCCTTGGGGTCACAGATGATGGAATGGCCGT
GGCTACAGGCTCCTGGGACTCCTTCCTCAAGATCTGGAACTAA

Translation (340 aa):
MSELEQLRQEAEQLRNQIRDARKACGDSTLTQITAGLDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLL
VSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELP
GHTGYLSCCRFLDDNQIITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKL
WDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSR
SGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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