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Report for CCDS46115.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46115.1 Public Homo sapiens 19 PPM1N 24 110 108 CCDS HistoryNCBI Gene:147699Re-query CCDS DB by CCDS ID:46115.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46115.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000451287.7 ENSP00000397050.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000451287.7Link to Ensembl Protein Viewer:ENSP00000397050.2Re-query CCDS DB by Nucleotide ID:ENST00000451287Re-query CCDS DB by Protein ID:ENSP00000397050
Original member Current member NCBI NM_001080401.2 NP_001073870.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001080401.2Link to Protein Sequence:NP_001073870.1Re-query CCDS DB by Nucleotide ID:NM_001080401Re-query CCDS DB by Protein ID:NP_001073870Link to BLAST:NP_001073870.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001073870.1 430 Q8N819-1 430 100% 0 0

Chromosomal Locations for CCDS 46115.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 45498473 45499411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45499949 45500066 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45500456 45500561 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45500650 45500710 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45502017 45502085 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1293 nt):
ATGGCGGTCCTGGCCCGCCAGCTGCAGCGTCTCCTCTGGACCGCTTGCAAGAAAAAGGAGAGGGAGAAGG
AGGGGAGGGAGGAAGAGGAGGAGGAGGAGGCGGGGCGCAGGGCCCCCGAAGGGCCTCGGTCTCTGTTGAC
AGCGCCGCGCCGCGCCCAGCGGCCGCACGGGGGTGCCGAGGCGTCTGGGGGCCTGCGCTTCGGGGCGAGC
GCAGCGCAAGGCTGGCGCGCGCGCATGGAGGATGCTCACTGCACTTGGCTTTCGTTACCTGGTCTGCCCC
CGGGCTGGGCCTTGTTTGCCGTCCTCGACGGCCACGGTGGGGCTCGAGCTGCCCGCTTCGGTGCACGCCA
TTTGCCAGGCCATGTGCTCCAGGAGCTGGGCCCGGAGCCTAGCGAGCCCGAGGGCGTGCGCGAGGCGCTG
CGCCGAGCCTTCTTGAGCGCCGACGAGCGCCTGCGCTCCCTCTGGCCCCGCGTGGAAACGGGCGGCTGCA
CGGCCGTGGTGTTGCTGGTCTCCCCGCGGTTTCTGTACCTGGCGCACTGCGGTGACTCCCGCGCGGTGCT
GAGCCGCGCTGGCGCCGTGGCCTTCAGCACAGAGGACCACCGGCCCCTTCGACCCCGGGAACGCGAGCGC
ATCCACGCCGCTGGCGGCACCATCCGCCGCCGCCGCGTCGAGGGCTCTCTGGCCGTGTCGCGAGCGTTGG
GCGACTTTACCTACAAGGAGGCTCCGGGGAGGCCCCCCGAGCTACAGCTCGTTTCTGCGGAGCCAGAGGT
GGCCGCACTGGCACGCCAGGCTGAGGACGAGTTCATGCTCCTGGCCTCTGATGGCGTCTGGGACACTGTG
TCTGGTGCTGCCCTGGCGGGACTGGTGGCTTCACGCCTCCGCTTGGGCCTGGCCCCAGAGCTTCTCTGCG
CGCAGCTGTTGGACACGTGTCTGTGCAAGGGCAGCCTGGACAACATGACCTGCATCCTGGTCTGCTTCCC
TGGGGCCCCTAGGCCTTCTGAGGAGGCGATCAGGAGGGAGCTAGCACTGGACGCAGCCCTGGGCTGCAGA
ATCGCTGAACTGTGTGCCTCTGCTCAGAAGCCCCCCAGCCTGAACACAGTTTTCAGGACTCTGGCCTCAG
AGGACATCCCAGATTTACCTCCTGGGGGAGGGCTGGACTGCAAGGCCACTGTCATTGCTGAAGTTTATTC
TCAGATCTGCCAGGTCTCAGAAGAGTGCGGAGAGAAGGGGCAGGATGGGGCTGGGAAGTCCAACCCCACG
CATTTGGGCTCAGCCTTGGACATGGAGGCCTGA

Translation (430 aa):
MAVLARQLQRLLWTACKKKEREKEGREEEEEEEAGRRAPEGPRSLLTAPRRAQRPHGGAEASGGLRFGAS
AAQGWRARMEDAHCTWLSLPGLPPGWALFAVLDGHGGARAARFGARHLPGHVLQELGPEPSEPEGVREAL
RRAFLSADERLRSLWPRVETGGCTAVVLLVSPRFLYLAHCGDSRAVLSRAGAVAFSTEDHRPLRPRERER
IHAAGGTIRRRRVEGSLAVSRALGDFTYKEAPGRPPELQLVSAEPEVAALARQAEDEFMLLASDGVWDTV
SGAALAGLVASRLRLGLAPELLCAQLLDTCLCKGSLDNMTCILVCFPGAPRPSEEAIRRELALDAALGCR
IAELCASAQKPPSLNTVFRTLASEDIPDLPPGGGLDCKATVIAEVYSQICQVSEECGEKGQDGAGKSNPT
HLGSALDMEA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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