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Report for CCDS36640.2 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
36640.2 |
Public |
Mus musculus |
13 |
Nedd9 |
23 |
108 |
98 |
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Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47
Review status: Reviewed (by RefSeq, Havana and CCDS collaboration) Sequence IDs included in CCDS 36640.2
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000163623.2 |
ENSMUSP00000125773.1 |
Accepted |
alive |
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NCBI |
NM_017464.5 |
NP_059492.3 |
Accepted |
alive |
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Chromosomal Locations for CCDS 36640.2
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (2502 nt): ATGAAGTACAAGAATCTTATGGCAAGGGCCTTGTATGACAACGTCCCTGAGTGTGCTGAGGAGCTGGCCT TCCGCAAGGGAGACATCTTAACTGTCATAGAGCAGAACACAGGAGGGCTTGAGGGATGGTGGCTGTGTTC CCTCCACGGTCGCCAAGGCATTGTCCCAGGGAACCGGGTGAAGCTTCTGATTGGTCCAGTGCAAGAGACC CCCGGTCATGAGCAGCCTACTCCTGGACCTATGCATCAGACCTTTGGCCAACAGAAACTCTATCAAGTGC CAAATTCCCAGGCAGCATCTCGGGATACCATCTACCAAGTGCCACCCTCCTACCAGAATCAGGGAATTTA CCAAGTACCCACTGGCCATGGCACTCCAGAACAAGATGTATATCAAGTACCACCATCAGTTCAGAGGAAC ATTGGCGGCACTAATGGACCCCTTCTAAGCAAAAAGGTGATCACCCCAGTGAGGACGGGCCATGGCTATG TGTACGAGTACCCATCCAGATACCAAAAGGATGTCTACGATGTCCCTCCTTCCCACAGCACTCAAGGGGT ATATGACATCCCTCCTTCCTCAGTAAAAGGCCCTGTGTTTTCAGTTCCAGTGGGAGAGATAAAACCTCAA GGGGTATATGACATTCCCCCCACCCAAGGGGTCTATGCCATTCCACCATCGGCTTGCCGAGATGAGGCAG GGCTCAGGGAAAAGGAATATGATTTCCCTCCTCCAATGAAGCAAGATGGAAAACCAGACACCAGACCTGA GGGGGTTTATGACATCCCTCCAACCAGCACCAAGACAGCAGGCAAGGACCTTCACATCAAATTCCCCTGT GATGCTCCAGGAGGTGTCGAACCAATGGCACGAAGACACCAGAGCTTTTCCCTGCACCATGCACCCTCTC AGCTGGGACAGTCTGGGGACACTCAGAGTGATGCCTATGATGTCCCCCGGGGAGTTCAGTTTCTGGAGGT ACCAACAGAAACCAGTGAAAAGGCAAATCCGGAGGAAAGAGACGGTGTCTACGATGTCCCTCTGCACAAC CCAGCAGATGCCAAAGGCTCTCGGGACGTGGTAGATGGGATCAACAGACTGTCTTTCTCCAGCACTGGCA GTACCAGGAGTAACATGTCCACCTCTTCCACCTCCTCAAAGGAGTCTTCACTGTCAGCCTCCCCGTCTCA AGACAAAAGGCTCCGACTGGACCCAGACACAGCCATAGAGAAGCTCTATCGGCTCCAGCAGACCCTGGAG ATGGGTGTGTGCAGCCTCATGTCACTGGTCACCACAGACTGGAGGTGCTACGGATACATGGAAAGGCACA TCAATGAGATCCGCACCGCGGTGGACAAAGTAGAGCTGTTCTTACGAGAATACCTCCATTTTGCCAAGGG AGCTTTAGCCAATGCCTCCTGCCTCCCAGAACTGGTCCTCCACAACAAAATGAAGCGGGAACTCCAAAGA GTAGAAGATTCCCACCAGATTCTAAGCCAAACCAGCCATGACTTGAATGAATGCAGCTGGTCCCTGAATA TTTTAGCTATCAATAAGCCCCAAAATAAGTGTGATGACCTAGACCGGTTTGTGATGGTCGCCAAGACAGT GCCAGACGACGCCAAACAACTGACCACCACCATCAGCACCTACGCGGAGACCCTCTTTAGAGCAGATCCT GCCAATTCCCATCTGAAGAATGGGCCCAACAGCATCATGAACTCAAGCGAGTACACACATCCGGGCTCCC AGATGCAGCCACTGCATCCTGGTGACTACAAAGCCCAGGTCCACAGTAAGCCGTTGCCTCCTAGTCTAAG CAAGGACCAGCCACCAGACTGCGGTAGCAGTGACGGTTCTGAGCGGAGTTGGATGGATGATTATGATTAT GTTCACCTACAGGGCAAGGAGGAGTTTGAGCGACAGCAGAAGGAGCTCTTGGAAAAGGAGAACATCATGA AGCAGAGTAAGGCGCAGCTGGAGCATCACCAGCTGAGTCAGTTCCAGCTGTTGGAACAAGAGATCACCAA GCCTGTGGAGAATGACATCTCTAAATGGAAGCCCTCTCAGAGCCTCCCAACCACCAACAACAGTGTGGGT GCTCAGGATAGGCAGTTGCTTTGCTTCTACTATGACCAGTGCGAGACCCATTTCATTTCCCTACTCAACG CCATCGACGCCCTCTTCAGCTGCGTCAGCTCAGCCCAACCCCCACGGATCTTTGTGGCGCACAGCAAGTT TGTCATTCTTAGTGCGCACAAACTGGTGTTCATTGGAGACACTCTGACAAGGCAGGTGGCTGCCCAGGAC ATTCGCAACAAAGTCAGGAACTCCAGCAACCAGCTCTGCGAACAGCTCAAGACGATAGTGATGGCGACCA AAATGGCCGCCCTCCACTACCCCAGTACCACCGCCTTGCAGGAAATGGTGCACCAGGTGACAGACCTGTC CAGAAATGCTCAGCTGTTTAAGCGTTCCTTGCTGGAGATGGCCACCTTTTGA
Translation (833 aa): MKYKNLMARALYDNVPECAEELAFRKGDILTVIEQNTGGLEGWWLCSLHGRQGIVPGNRVKLLIGPVQET PGHEQPTPGPMHQTFGQQKLYQVPNSQAASRDTIYQVPPSYQNQGIYQVPTGHGTPEQDVYQVPPSVQRN IGGTNGPLLSKKVITPVRTGHGYVYEYPSRYQKDVYDVPPSHSTQGVYDIPPSSVKGPVFSVPVGEIKPQ GVYDIPPTQGVYAIPPSACRDEAGLREKEYDFPPPMKQDGKPDTRPEGVYDIPPTSTKTAGKDLHIKFPC DAPGGVEPMARRHQSFSLHHAPSQLGQSGDTQSDAYDVPRGVQFLEVPTETSEKANPEERDGVYDVPLHN PADAKGSRDVVDGINRLSFSSTGSTRSNMSTSSTSSKESSLSASPSQDKRLRLDPDTAIEKLYRLQQTLE MGVCSLMSLVTTDWRCYGYMERHINEIRTAVDKVELFLREYLHFAKGALANASCLPELVLHNKMKRELQR VEDSHQILSQTSHDLNECSWSLNILAINKPQNKCDDLDRFVMVAKTVPDDAKQLTTTISTYAETLFRADP ANSHLKNGPNSIMNSSEYTHPGSQMQPLHPGDYKAQVHSKPLPPSLSKDQPPDCGSSDGSERSWMDDYDY VHLQGKEEFERQQKELLEKENIMKQSKAQLEHHQLSQFQLLEQEITKPVENDISKWKPSQSLPTTNNSVG AQDRQLLCFYYDQCETHFISLLNAIDALFSCVSSAQPPRIFVAHSKFVILSAHKLVFIGDTLTRQVAAQD IRNKVRNSSNQLCEQLKTIVMATKMAALHYPSTTALQEMVHQVTDLSRNAQLFKRSLLEMATF
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