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Report for CCDS6857.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6857.2 Public Homo sapiens 9 OLFML2A 24 110 108 CCDS HistoryNCBI Gene:169611Re-query CCDS DB by CCDS ID:6857.2Re-query CCDS DB by GeneID:169611See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 6857.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000373580.8 ENSP00000362682.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000373580.8Link to Ensembl Protein Viewer:ENSP00000362682.3Re-query CCDS DB by Nucleotide ID:ENST00000373580Re-query CCDS DB by Protein ID:ENSP00000362682
Original member Current member NCBI NM_182487.4 NP_872293.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_182487.4Link to Protein Sequence:NP_872293.2Re-query CCDS DB by Nucleotide ID:NM_182487Re-query CCDS DB by Protein ID:NP_872293Link to BLAST:NP_872293.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_872293.2 652 Q68BL7-1 652 100% 0 0

Chromosomal Locations for CCDS 6857.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 124777271 124777360 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 124786975 124787238 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 124795024 124795131 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 124799285 124799491 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 124801414 124801663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 124804094 124804342 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 124807781 124807966 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 124809808 124810412 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1959 nt):
ATGGCCGCTGCCGCCCTCCCGCCCCGGCCGCTGCTCCTTCTGCCGCTAGTGCTGCTGCTGAGCGGCCGCC
CCACGCGCGCCGACAGTAAGGTGTTTGGGGACCTGGACCAGGTGAGGATGACCTCGGAGGGCTCCGACTG
CCGTTGCAAGTGCATCATGCGGCCCCTGAGCAAGGACGCGTGTAGCCGAGTGCGCAGTGGGCGGGCACGC
GTGGAGGACTTCTACACGGTGGAGACTGTGAGCTCGGGCACTGACTGCCGCTGCTCCTGTACCGCACCTC
CCTCCTCTCTCAACCCCTGTGAGAACGAGTGGAAGATGGAGAAACTCAAAAAGCAGGCGCCCGAGCTCCT
CAAGCTGCAGTCCATGGTGGATCTCCTGGAGGGCACCCTGTACAGCATGGACTTGATGAAGGTGCACGCC
TACGTCCACAAGGTGGCCTCCCAGATGAACACACTGGAAGAGAGCATCAAGGCCAACCTGAGCCGGGAGA
ATGAGGTGGTGAAGGACAGCGTGCGCCACCTCAGTGAGCAGTTGAGGCACTATGAGAATCACTCTGCCAT
CATGCTGGGCATCAAGAAGGAGCTGTCCCGCCTGGGCCTCCAGCTGCTGCAGAAGGATGCCGCCGCCGCC
CCTGCCACCCCTGCCACGGGCACTGGTAGCAAGGCCCAGGACACAGCTAGAGGAAAAGGCAAGGACATCA
GCAAGTATGGCAGTGTGCAGAAAAGCTTTGCAGACAGAGGCCTCCCAAAACCTCCCAAGGAGAAGCTGCT
TCAGGTGGAGAAGCTGAGAAAGGAGAGCGGCAAGGGCAGTTTCCTCCAGCCCACAGCCAAGCCCCGCGCC
CTGGCCCAGCAGCAGGCTGTGATCCGGGGCTTCACCTACTACAAGGCAGGCAAGCAGGAGGTGACCGAGG
CGGTGGCAGACAACACCCTCCAGGGCACTTCCTGGCTGGAGCAACTGCCGCCCAAGGTGGAGGGCAGGTC
CAACTCCGCAGAGCCCAACTCCGCAGAGCAGGATGAGGCTGAGCCCAGGTCCTCCGAGCGAGTGGACCTG
GCTTCTGGCACCCCCACTTCAATCCCTGCCACCACCACCACCGCCACCACCACCCCAACCCCCACCACCA
GTCTCCTGCCCACCGAGCCACCTTCAGGTCCAGAAGTCTCCAGCCAAGGCAGAGAGGCGAGCTGTGAGGG
CACCCTCCGGGCTGTGGACCCCCCTGTGAGGCACCACAGCTATGGGCGCCACGAGGGAGCCTGGATGAAG
GACCCTGCAGCTCGAGACGACAGGATCTATGTCACCAACTACTACTATGGAAACAGCCTGGTGGAGTTCC
GCAACCTGGAAAACTTCAAGCAAGGCCGCTGGAGTAACATGTACAAGCTACCCTACAACTGGATCGGCAC
AGGCCACGTGGTGTACCAGGGCGCCTTCTACTACAACCGCGCCTTCACCAAGAACATCATCAAGTACGAC
CTACGGCAGCGCTTCGTGGCCTCCTGGGCGCTGCTGCCCGACGTGGTATATGAGGACACCACACCTTGGA
AGTGGCGCGGACACTCGGACATTGACTTTGCCGTGGACGAGAGCGGCCTGTGGGTCATCTACCCCGCCGT
GGACGACCGCGATGAGGCCCAGCCCGAGGTGATCGTCCTGAGTCGCTTGGACCCCGGCGATCTCTCCGTG
CACCGGGAGACCACGTGGAAGACACGGCTGCGGCGGAACTCCTACGGGAACTGCTTCCTGGTGTGCGGCA
TCCTGTATGCCGTGGACACGTACAACCAGCAGGAAGGCCAGGTCGCCTACGCTTTCGACACGCACACGGG
CACCGACGCACGCCCCCAGCTGCCGTTCCTCAACGAGCACGCCTACACCACCCAGATCGACTACAACCCC
AAGGAGCGGGTGCTGTACGCCTGGGACAATGGCCACCAGCTCACCTACACCCTCCACTTCGTGGTCTGA

Translation (652 aa):
MAAAALPPRPLLLLPLVLLLSGRPTRADSKVFGDLDQVRMTSEGSDCRCKCIMRPLSKDACSRVRSGRAR
VEDFYTVETVSSGTDCRCSCTAPPSSLNPCENEWKMEKLKKQAPELLKLQSMVDLLEGTLYSMDLMKVHA
YVHKVASQMNTLEESIKANLSRENEVVKDSVRHLSEQLRHYENHSAIMLGIKKELSRLGLQLLQKDAAAA
PATPATGTGSKAQDTARGKGKDISKYGSVQKSFADRGLPKPPKEKLLQVEKLRKESGKGSFLQPTAKPRA
LAQQQAVIRGFTYYKAGKQEVTEAVADNTLQGTSWLEQLPPKVEGRSNSAEPNSAEQDEAEPRSSERVDL
ASGTPTSIPATTTTATTTPTPTTSLLPTEPPSGPEVSSQGREASCEGTLRAVDPPVRHHSYGRHEGAWMK
DPAARDDRIYVTNYYYGNSLVEFRNLENFKQGRWSNMYKLPYNWIGTGHVVYQGAFYYNRAFTKNIIKYD
LRQRFVASWALLPDVVYEDTTPWKWRGHSDIDFAVDESGLWVIYPAVDDRDEAQPEVIVLSRLDPGDLSV
HRETTWKTRLRRNSYGNCFLVCGILYAVDTYNQQEGQVAYAFDTHTGTDARPQLPFLNEHAYTTQIDYNP
KERVLYAWDNGHQLTYTLHFVV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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