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Report for CCDS8581.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8581.1 Public Homo sapiens 12 GDF3 24 110 108 CCDS HistoryNCBI Gene:9573Re-query CCDS DB by CCDS ID:8581.1Re-query CCDS DB by GeneID:9573See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8581.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000329913.4 ENSP00000331745.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000329913.4Link to Ensembl Protein Viewer:ENSP00000331745.3Re-query CCDS DB by Nucleotide ID:ENST00000329913Re-query CCDS DB by Protein ID:ENSP00000331745
Original member Current member NCBI NM_020634.3 NP_065685.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020634.3Link to Protein Sequence:NP_065685.1Re-query CCDS DB by Nucleotide ID:NM_020634Re-query CCDS DB by Protein ID:NP_065685Link to BLAST:NP_065685.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_065685.1 364 Q9NR23 364 100% 0 0

Chromosomal Locations for CCDS 8581.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 7689878 7690704 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 7695461 7695728 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1095 nt):
ATGCTTCGTTTCTTGCCAGATTTGGCTTTCAGCTTCCTGTTAATTCTGGCTTTGGGCCAGGCAGTCCAAT
TTCAAGAATATGTCTTTCTCCAATTTCTGGGCTTAGATAAGGCGCCTTCACCCCAGAAGTTCCAACCTGT
GCCTTATATCTTGAAGAAAATTTTCCAGGATCGCGAGGCAGCAGCGACCACTGGGGTCTCCCGAGACTTA
TGCTACGTAAAGGAGCTGGGCGTCCGCGGGAATGTACTTCGCTTTCTCCCAGACCAAGGTTTCTTTCTTT
ACCCAAAGAAAATTTCCCAAGCTTCCTCCTGCCTGCAGAAGCTCCTCTACTTTAACCTGTCTGCCATCAA
AGAAAGGGAACAGTTGACATTGGCCCAGCTGGGCCTGGACTTGGGGCCCAATTCTTACTATAACCTGGGA
CCAGAGCTGGAACTGGCTCTGTTCCTGGTTCAGGAGCCTCATGTGTGGGGCCAGACCACCCCTAAGCCAG
GTAAAATGTTTGTGTTGCGGTCAGTCCCATGGCCACAAGGTGCTGTTCACTTCAACCTGCTGGATGTAGC
TAAGGATTGGAATGACAACCCCCGGAAAAATTTCGGGTTATTCCTGGAGATACTGGTCAAAGAAGATAGA
GACTCAGGGGTGAATTTTCAGCCTGAAGACACCTGTGCCAGACTAAGATGCTCCCTTCATGCTTCCCTGC
TGGTGGTGACTCTCAACCCTGATCAGTGCCACCCTTCTCGGAAAAGGAGAGCAGCCATCCCTGTCCCCAA
GCTTTCTTGTAAGAACCTCTGCCACCGTCACCAGCTATTCATTAACTTCCGGGACCTGGGTTGGCACAAG
TGGATCATTGCCCCCAAGGGGTTCATGGCAAATTACTGCCATGGAGAGTGTCCCTTCTCACTGACCATCT
CTCTCAACAGCTCCAATTATGCTTTCATGCAAGCCCTGATGCATGCCGTTGACCCAGAGATCCCCCAGGC
TGTGTGTATCCCCACCAAGCTGTCTCCCATTTCCATGCTCTACCAGGACAATAATGACAATGTCATTCTA
CGACATTATGAAGACATGGTAGTCGATGAATGTGGGTGTGGGTAG

Translation (364 aa):
MLRFLPDLAFSFLLILALGQAVQFQEYVFLQFLGLDKAPSPQKFQPVPYILKKIFQDREAAATTGVSRDL
CYVKELGVRGNVLRFLPDQGFFLYPKKISQASSCLQKLLYFNLSAIKEREQLTLAQLGLDLGPNSYYNLG
PELELALFLVQEPHVWGQTTPKPGKMFVLRSVPWPQGAVHFNLLDVAKDWNDNPRKNFGLFLEILVKEDR
DSGVNFQPEDTCARLRCSLHASLLVVTLNPDQCHPSRKRRAAIPVPKLSCKNLCHRHQLFINFRDLGWHK
WIIAPKGFMANYCHGECPFSLTISLNSSNYAFMQALMHAVDPEIPQAVCIPTKLSPISMLYQDNNDNVIL
RHYEDMVVDECGCG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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