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Report for CCDS9520.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9520.1 Public Homo sapiens 13 ANKRD10 24 110 108 CCDS HistoryNCBI Gene:55608Re-query CCDS DB by CCDS ID:9520.1Re-query CCDS DB by GeneID:55608See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9520.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000267339.6 ENSP00000267339.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000267339.6Link to Ensembl Protein Viewer:ENSP00000267339.2Re-query CCDS DB by Nucleotide ID:ENST00000267339Re-query CCDS DB by Protein ID:ENSP00000267339
Original member Current member NCBI NM_017664.4 NP_060134.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_017664.4Link to Protein Sequence:NP_060134.2Re-query CCDS DB by Nucleotide ID:NM_017664Re-query CCDS DB by Protein ID:NP_060134Link to BLAST:NP_060134.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060134.2 420 Q9NXR5-1 420 100% 0 0

Chromosomal Locations for CCDS 9520.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 13 (NC_000013.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 110879637 110880112 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 110883698 110883793 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 110893028 110893263 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 110906033 110906124 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 110910618 110910770 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 110914725 110914934 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1263 nt):
ATGTCGGCGGCGGGAGCGGGCGCGGGCGTAGAGGCGGGCTTCTCCAGCGAGGAGCTGCTCTCGCTCCGTT
TCCCGCTGCACCGCGCCTGCCGCGACGGGGACCTGGCCACGCTCTGCTCGCTGCTGCAGCAGACACCCCA
CGCCCACCTGGCCTCTGAGGACTCCTTCTATGGCTGGACGCCCGTGCACTGGGCCGCGCATTTCGGCAAG
TTGGAGTGCTTAGTGCAGTTGGTGAGAGCGGGAGCCACACTCAACGTCTCCACCACACGGTACGCGCAGA
CGCCAGCCCACATTGCAGCCTTTGGGGGACATCCTCAGTGCCTGGTCTGGCTGATTCAAGCAGGAGCCAA
CATTAACAAACCGGATTGTGAGGGTGAAACTCCCATTCACAAGGCAGCTCGCTCTGGGAGCCTAGAATGC
ATCAGTGCCCTTGTGGCGAATGGGGCTCACGTCGACCTGAGAAATGCCAGTGGCCTGACAGCAGCAGACA
TTGCACAAACCCAGGGTTTCCAAGAGTGTGCCCAGTTTCTCTTGAACCTCCAGAATTGTCATCTGAACCA
TTTCTATAACAATGGCATCTTAAATGGGGGTCATCAGAATGTATTTCCTAATCATATTAGTGTGGGAACA
AATCGAAAGAGATGCTTGGAAGACTCAGAAGACTTTGGAGTAAAGAAAGCTAGAACTGAAGCTCAAAGCT
TGGATTCTGCCGTGCCACTCACGAATGGCGACACAGAAGACGATGCTGACAAAATGCACGTTGATAGGGA
GTTTGCTGTTGTAACAGATATGAAAAACAGTAGCTCCGTATCGAATACATTGACAAATGGATGTGTCATC
AATGGACATTTGGACTTCCCCTCCACGACCCCGCTCAGTGGGATGGAAAGCAGGAATGGCCAGTGCTTGA
CAGGAACTAACGGAATTAGCAGTGGATTAGCCCCAGGACAGCCGTTTCCGAGTAGCCAGGGTTCTCTCTG
CATTAGTGGGACTGAGGAGCCAGAGAAGACCCTGAGAGCTAACCCTGAGTTGTGCGGTTCTCTGCACCTG
AACGGGAGTCCAAGTAGCTGCATAGCCAGTAGGCCTTCCTGGGTGGAAGACATTGGGGATAACCTGTACT
ATGGACACTACCACGGGTTTGGGGACACTGCTGAAAGCATCCCAGAACTGAACAGTGTGGTCGAGCATTC
CAAGTCCGTGAAGGTGCAGGAGCGGTACGACAGTGCCGTGCTGGGCACCATGCACCTGCACCACGGCTCC
TAG

Translation (420 aa):
MSAAGAGAGVEAGFSSEELLSLRFPLHRACRDGDLATLCSLLQQTPHAHLASEDSFYGWTPVHWAAHFGK
LECLVQLVRAGATLNVSTTRYAQTPAHIAAFGGHPQCLVWLIQAGANINKPDCEGETPIHKAARSGSLEC
ISALVANGAHVDLRNASGLTAADIAQTQGFQECAQFLLNLQNCHLNHFYNNGILNGGHQNVFPNHISVGT
NRKRCLEDSEDFGVKKARTEAQSLDSAVPLTNGDTEDDADKMHVDREFAVVTDMKNSSSVSNTLTNGCVI
NGHLDFPSTTPLSGMESRNGQCLTGTNGISSGLAPGQPFPSSQGSLCISGTEEPEKTLRANPELCGSLHL
NGSPSSCIASRPSWVEDIGDNLYYGHYHGFGDTAESIPELNSVVEHSKSVKVQERYDSAVLGTMHLHHGS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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