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Report for CCDS43607.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43607.1 Public Homo sapiens 7 RSBN1L 24 110 108 CCDS HistoryNCBI Gene:222194Re-query CCDS DB by CCDS ID:43607.1Re-query CCDS DB by GeneID:222194See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43607.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000334955.13 ENSP00000334040.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000334955.13Link to Ensembl Protein Viewer:ENSP00000334040.7Re-query CCDS DB by Nucleotide ID:ENST00000334955Re-query CCDS DB by Protein ID:ENSP00000334040
Original member Current member NCBI NM_198467.3 NP_940869.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_198467.3Link to Protein Sequence:NP_940869.2Re-query CCDS DB by Nucleotide ID:NM_198467Re-query CCDS DB by Protein ID:NP_940869Link to BLAST:NP_940869.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_940869.2 846 Q6PCB5-1 846 100% 0 0

Chromosomal Locations for CCDS 43607.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 77696470 77697055 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 77736410 77736526 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 77749424 77750064 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 77765495 77765632 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 77768661 77768803 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 77773147 77773314 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 77778338 77778446 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 77778530 77779168 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2541 nt):
ATGGCGGAACCGCCGAGCCCCGTGCACTGTGTCGCTGCCGCGGCCCCCACCGCCACCGTCTCGGAGAAAG
AACCGTTTGGCAAGCTGCAACTCTCCTCCCGGGACCCTCCGGGTTCTCTGTCCGCCAAGAAGGTCCGGAC
TGAGGAGAAGAAGGCACCGCGGAGAGTGAACGGAGAAGGGGGCAGCGGCGGGAACAGCAGGCAGCTGCAG
CCGCCGGCAGCACCTTCGCCTCAGAGCTATGGCAGCCCCGCGTCTTGGAGCTTTGCCCCTCTGTCTGCTG
CTCCCTCCCCGTCCTCTTCTCGGAGCAGTTTCTCTTTCTCCGCTGGCACGGCCGTTCCCTCCTCAGCCTC
CGCTTCCTTGTCTCAGCCGGTGCCGCGCAAACTGCTGGTCCCTCCTACGCTGCTGCACGCTCAGCCTCAC
CATCTCCTCCTGCCCGCCGCCGCCGCCGCTGCCTCGGCTAACGCCAAGTCGCGCAGACCTAAGGAGAAGC
GGGAGAAGGAGAGGAGGAGGCACGGTCTCGGTGGGGCCCGAGAGGCCGGCGGGGCCTCCCGGGAGGAGAA
CGGGGAGGTGAAGCCGCTGCCCCGAGATAAAATCAAAGACAAAATTAAAGAGAGAGACAAAGAAAAAGAA
AGAGAAAAAAAGAAACATAAAGTAATGAATGAGATCAAGAAAGAGAATGGAGAAGTAAAGATTTTGCTGA
AAAGTGGGAAGGAGAAACCAAAAACAAATATAGAAGACTTACAAATTAAAAAGGTAAAGAAGAAAAAGAA
AAAGAAACACAAAGAGAATGAAAAACGGAAGCGTCCGAAAATGTATAGCAAATCTATTCAGACCATCTGC
TCAGGATTGCTAACTGATGTTGAAGATCAAGCAGCCAAAGGCATCCTAAATGATAACATAAAAGATTACG
TTGGGAAGAATTTGGATACCAAGAACTATGATTCCAAAATTCCAGAGAACAGTGAGTTTCCATTTGTCTC
ATTAAAGGAGCCACGAGTTCAGAATAACCTCAAAAGGTTGGACACTTTGGAATTTAAACAACTCATTCAT
ATAGAGCACCAGCCTAATGGAGGTGCATCGGTTATCCATGCCTACAGTAACGAACTCTCCCACCTGTCTC
CTATGGAGATGGAGAGGTTTGCAGAAGAGTTTGTGGGTCTAGTGTTCAGTGAAAATGAAAACTCTGCAGC
TTTCTACGTGATGGGTATTGTTCATGGGGCAGCTACTTATTTACCTGACTTTTTAGACTATTTTTCATTT
AATTTTCCCAATTCACCAGTGAAAATGGAGATATTGGGAAAGAAAGATATAGAGACAACGACTATGTCCA
ATTTTCATGCTCAGGTAAAAAGAACGTATTCTCATGGTACTTACAGAGCTGGCCCAATGAGACAAATAAG
CTTGGTGGGAGCAGTTGATGAAGAAGTAGGAGATTATTTCCCTGAGTTCCTTGACATGTTGGAAGAGTCA
CCATTTTTAAAATGTACACTGCCATGGGGGACGCTATCTAGTCTAAAATTACAGAGTCGAAAAGATAGTG
ATGATGGTCCCATCATGTGGGTTCGTCCAGGAGAACAAATGATCCCTGTGGCTGATATGCCAAAGTCACC
TTTCAAAAGGAAAAGAACTACCAATGAAATAAAAAATCTTCAGTACCTACCTCGAACAAGTGAGCCCCGT
GAGATGCTCTTTGAAGACAGGACAAGAGCTCATGCAGATCATATAGGACAAGGTTTTGAACGACAGACTA
CAGCTGCTGTTGGAGTGCTGAAGGCTGTGCACTGTGGAGAGTGGCCTGATCAACCCCGTATAACCAAAGA
TGTAATTTGTTTTCATGCTGAAGATTTCTTAGAAGTAGTTCAACGAATGCAGTTAGATTTACATGAACCT
CCACTGTCCCAGTGTGTCCAATGGGTTGATGATGCAAAACTGAATCAACTGAGGAGGGAAGGCATTCGCT
ATGCCAGGATTCAGCTATATGATAATGACATTTATTTTATTCCAAGGAATGTTGTTCATCAGTTCAAGAC
AGTTTCAGCTGTATGCAGTTTAGCATGGCATATTCGGCTCAAATTATATCACTCAGAGGAGGACACTTCT
CAGAATACAGCTACTCATGAAACAGGCACATCATCAGATTCCACATCATCTGTTCTTGGACCTCACACTG
ACAACATGATTTGTGCTGTAAGCAAAGCCTCCTTGGATTCTGTTTTTTCAGATAAACTTCATTCTAAATA
TGAATTACAGCAGATTAAACATGAACCTATTGCATCTGTAAGAATCAAGGAAGAACCTGTGAATGTTAAT
ATTCCTGAAAAGACTACAGCACTGAATAATATGGATGGCAAGAATGTTAAAGCAAAATTGGATCATGTTC
AATTTGCAGAATTTAAGATTGACATGGATTCTAAATTTGAAAATAGCAACAAAGATTTAAAGGAAGAATT
GTGCCCTGGAAATCTAAGTCTAGTTGATACAAGGCAACACAGTTCAGCACATTCAAATCAAGATAAAAAA
GACGATGACATTTTGTGCTAA

Translation (846 aa):
MAEPPSPVHCVAAAAPTATVSEKEPFGKLQLSSRDPPGSLSAKKVRTEEKKAPRRVNGEGGSGGNSRQLQ
PPAAPSPQSYGSPASWSFAPLSAAPSPSSSRSSFSFSAGTAVPSSASASLSQPVPRKLLVPPTLLHAQPH
HLLLPAAAAAASANAKSRRPKEKREKERRRHGLGGAREAGGASREENGEVKPLPRDKIKDKIKERDKEKE
REKKKHKVMNEIKKENGEVKILLKSGKEKPKTNIEDLQIKKVKKKKKKKHKENEKRKRPKMYSKSIQTIC
SGLLTDVEDQAAKGILNDNIKDYVGKNLDTKNYDSKIPENSEFPFVSLKEPRVQNNLKRLDTLEFKQLIH
IEHQPNGGASVIHAYSNELSHLSPMEMERFAEEFVGLVFSENENSAAFYVMGIVHGAATYLPDFLDYFSF
NFPNSPVKMEILGKKDIETTTMSNFHAQVKRTYSHGTYRAGPMRQISLVGAVDEEVGDYFPEFLDMLEES
PFLKCTLPWGTLSSLKLQSRKDSDDGPIMWVRPGEQMIPVADMPKSPFKRKRTTNEIKNLQYLPRTSEPR
EMLFEDRTRAHADHIGQGFERQTTAAVGVLKAVHCGEWPDQPRITKDVICFHAEDFLEVVQRMQLDLHEP
PLSQCVQWVDDAKLNQLRREGIRYARIQLYDNDIYFIPRNVVHQFKTVSAVCSLAWHIRLKLYHSEEDTS
QNTATHETGTSSDSTSSVLGPHTDNMICAVSKASLDSVFSDKLHSKYELQQIKHEPIASVRIKEEPVNVN
IPEKTTALNNMDGKNVKAKLDHVQFAEFKIDMDSKFENSNKDLKEELCPGNLSLVDTRQHSSAHSNQDKK
DDDILC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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