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Report for CCDS33335.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33335.1 Public Homo sapiens 2 RBM45 24 110 108 CCDS HistoryNCBI Gene:129831Re-query CCDS DB by CCDS ID:33335.1Re-query CCDS DB by GeneID:129831See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33335.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000286070.10 ENSP00000286070.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000286070.10Link to Ensembl Protein Viewer:ENSP00000286070.5Re-query CCDS DB by Nucleotide ID:ENST00000286070Re-query CCDS DB by Protein ID:ENSP00000286070
Original member Current member NCBI NM_001365578.1 NP_001352507.1 Accepted alive Link to Nucleotide Sequence:NM_001365578.1Link to Protein Sequence:NP_001352507.1Re-query CCDS DB by Nucleotide ID:NM_001365578Re-query CCDS DB by Protein ID:NP_001352507Link to BLAST:NP_001352507.1
Original member Current member NCBI NM_152945.4 NP_694453.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152945.4Link to Protein Sequence:NP_694453.2Re-query CCDS DB by Nucleotide ID:NM_152945Re-query CCDS DB by Protein ID:NP_694453Link to BLAST:NP_694453.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001352507.1 474 Q8IUH3-3 474 100% 0 0
NP_694453.2 474 Q8IUH3-3 474 100% 0 0

Chromosomal Locations for CCDS 33335.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 178112547 178112846 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 178116262 178116384 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 178118055 178118181 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 178120287 178120409 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 178121180 178121359 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 178123522 178123651 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 178123828 178123912 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 178124127 178124290 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 178125984 178126176 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1425 nt):
ATGGACGAAGCTGGCAGCTCTGCGAGCGGCGGGGGCTTCCGCCCGGGCGTGGACAGCCTGGACGAACCGC
CCAACAGCCGCATCTTCCTTGTGATCAGCAAGTACACACCTGAGTCGGTGCTGAGGGAGCGCTTCTCGCC
TTTTGGCGACATCCAGGACATCTGGGTGGTGCGGGACAAGCACACCAAGGAGTCCAAGGGCATTGCTTTC
GTCAAGTTCGCCCGCAGCTCACAGGCCTGCAGGGCCATGGAGGAGATGCATGGCCAGTGCCTCGGCCCCA
ACGACACCAAGCCCATCAAGGTTTTCATTGCTCAGTCCCGATCATCTGGAAGTCACCGAGATGTTGAAGA
TGAAGAACTTACAAGAATCTTTGTTATGATACCAAAGTCCTACACAGAAGAAGATCTGCGGGAAAAATTT
AAGGTGTATGGAGATATCGAGTATTGCAGCATTATTAAGAATAAAGTGACTGGAGAAAGTAAAGGTTTGG
GCTACGTACGATACTTAAAACCATCACAAGCTGCCCAAGCAATAGAAAACTGTGATCGAAGTTTTAGAGC
AATCTTGGCTGAACCTAAAAATAAAGCATCTGAATCCTCTGAACAAGATTATTATAGTAATATGAGGCAA
GAAGCTTTGGGACATGAACCTAGAGTAAATATGTTTCCATTTGAACAACAATCTGAATTTTCAAGTTTTG
ACAAGAATGATAGCCGAGGCCAGGAAGCAATCTCCAAACGCTTGTCAGTTGTATCAAGAGTTCCTTTCAC
TGAAGAACAGCTTTTCAGCATTTTTGATATAGTACCAGGATTGGAATATTGTGAAGTTCAACGAGATCCT
TATTCAAATTATGGTCATGGAGTGGTTCAGTATTTTAATGTAGCATCAGCTATTTATGCAAAATACAAAT
TACATGGATTTCAGTACCCTCCTGGGAACCGAATAGGTGTTTCCTTCATTGATGATGGAAGTAATGCAAC
AGATCTCCTTAGAAAAATGGCAACACAGATGGTAGCTGCACAGCTTGCATCAATGGTGTGGAATAACCCA
AGTCAGCAACAATTTATGCAATTTGGAGGAAGCTCTGGATCACAGTTGCCTCAAATCCAGACAGATGTTG
TACTTCCATCATGCAAAAAAAAAGCTCCTGCTGAAACTCCTGTGAAAGAAAGACTTTTTATTGTGTTTAA
TCCTCATCCTTTACCTTTAGACGTATTAGAAGATATATTCTGTCGTTTTGGTAACCTGATCGAAGTTTAC
CTTGTGTCAGGAAAAAATGTGGGGTATGCCAAGTATGCCGATAGAATAAGTGCTAATGATGCCATTGCCA
CTCTACATGGAAAGATTCTGAATGGGGTGAGACTTAAAGTTATGCTGGCAGATTCGCCAAGAGAAGAATC
TAACAAACGGCAAAGAACTTACTGA

Translation (474 aa):
MDEAGSSASGGGFRPGVDSLDEPPNSRIFLVISKYTPESVLRERFSPFGDIQDIWVVRDKHTKESKGIAF
VKFARSSQACRAMEEMHGQCLGPNDTKPIKVFIAQSRSSGSHRDVEDEELTRIFVMIPKSYTEEDLREKF
KVYGDIEYCSIIKNKVTGESKGLGYVRYLKPSQAAQAIENCDRSFRAILAEPKNKASESSEQDYYSNMRQ
EALGHEPRVNMFPFEQQSEFSSFDKNDSRGQEAISKRLSVVSRVPFTEEQLFSIFDIVPGLEYCEVQRDP
YSNYGHGVVQYFNVASAIYAKYKLHGFQYPPGNRIGVSFIDDGSNATDLLRKMATQMVAAQLASMVWNNP
SQQQFMQFGGSSGSQLPQIQTDVVLPSCKKKAPAETPVKERLFIVFNPHPLPLDVLEDIFCRFGNLIEVY
LVSGKNVGYAKYADRISANDAIATLHGKILNGVRLKVMLADSPREESNKRQRTY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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