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Report for CCDS3629.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3629.1 Public Homo sapiens 4 PPM1K 24 110 108 CCDS HistoryNCBI Gene:152926Re-query CCDS DB by CCDS ID:3629.1Re-query CCDS DB by GeneID:152926See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3629.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000608933.6 ENSP00000477341.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000608933.6Link to Ensembl Protein Viewer:ENSP00000477341.1Re-query CCDS DB by Nucleotide ID:ENST00000608933Re-query CCDS DB by Protein ID:ENSP00000477341
Original member Current member NCBI NM_152542.5 NP_689755.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152542.5Link to Protein Sequence:NP_689755.3Re-query CCDS DB by Nucleotide ID:NM_152542Re-query CCDS DB by Protein ID:NP_689755Link to BLAST:NP_689755.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689755.3 372 Q8N3J5-1 372 100% 0 0

Chromosomal Locations for CCDS 3629.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 88262595 88262726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 88265001 88265135 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 88268190 88268334 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 88268741 88268906 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 88277143 88277243 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 88278144 88278583 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1119 nt):
ATGTCAACAGCTGCCTTAATTACTTTGGTCAGAAGTGGTGGGAACCAGGTGAGAAGGAGAGTGCTGCTAA
GCTCCCGCCTGCTGCAGGACGACAGGCGGGTGACACCCACGTGCCACAGCTCCACTTCAGAGCCTAGGTG
TTCTCGGTTTGACCCAGATGGTAGTGGGAGTCCAGCTACCTGGGACAATTTTGGGATCTGGGATAACCGC
ATTGATGAGCCAATTCTGCTGCCACCCAGCATTAAGTATGGCAAGCCAATTCCCAAAATCAGCTTGGAAA
ATGTGGGGTGCGCCTCACAGATTGGCAAACGGAAAGAGAATGAAGATCGGTTTGACTTCGCTCAGCTGAC
AGATGAGGTCCTGTACTTTGCAGTGTATGATGGACACGGTGGACCTGCAGCAGCTGATTTCTGTCATACC
CACATGGAGAAATGTATTATGGATTTGCTTCCTAAGGAGAAGAACTTGGAAACTCTGTTGACCTTGGCTT
TTCTAGAAATAGATAAAGCCTTTTCGAGTCATGCCCGCCTGTCTGCTGATGCAACTCTTCTGACCTCTGG
GACTACTGCAACAGTAGCCCTATTGCGAGATGGTATTGAACTGGTTGTAGCCAGTGTTGGGGACAGCCGG
GCTATTTTGTGTAGAAAAGGAAAACCCATGAAGCTGACCATTGACCATACTCCAGAAAGAAAAGATGAAA
AAGAAAGGATCAAGAAATGTGGTGGTTTTGTAGCTTGGAATAGTTTGGGGCAGCCTCACGTAAATGGCAG
GCTTGCAATGACAAGAAGTATTGGAGATTTGGACCTTAAGACCAGTGGTGTCATAGCAGAACCTGAAACT
AAGAGGATTAAGTTACATCATGCTGATGACAGCTTCCTGGTCCTCACCACAGATGGAATTAACTTCATGG
TGAATAGTCAAGAGATTTGTGACTTTGTCAATCAGTGCCATGATCCCAACGAAGCAGCCCATGCGGTGAC
TGAACAGGCAATACAGTACGGTACTGAGGATAACAGTACTGCAGTAGTAGTGCCTTTTGGTGCCTGGGGA
AAATATAAGAACTCTGAAATCAACTTCTCATTCAGCAGAAGCTTTGCCTCCAGTGGACGATGGGCCTGA

Translation (372 aa):
MSTAALITLVRSGGNQVRRRVLLSSRLLQDDRRVTPTCHSSTSEPRCSRFDPDGSGSPATWDNFGIWDNR
IDEPILLPPSIKYGKPIPKISLENVGCASQIGKRKENEDRFDFAQLTDEVLYFAVYDGHGGPAAADFCHT
HMEKCIMDLLPKEKNLETLLTLAFLEIDKAFSSHARLSADATLLTSGTTATVALLRDGIELVVASVGDSR
AILCRKGKPMKLTIDHTPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSGVIAEPET
KRIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQCHDPNEAAHAVTEQAIQYGTEDNSTAVVVPFGAWG
KYKNSEINFSFSRSFASSGRWA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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